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Job DescriptionP76641
Confidence99.47%DateThu Jan 5 12:25:13 GMT 2012
Rank90Aligned Residues257
% Identity13%Templated1onwa2
SCOP infoTIM beta/alpha-barrel Metallo-dependent hydrolases Isoaspartyl dipeptidase, catalytic domain
Resolution1.65

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   77..80.........90.........100.........110.........120.........130.........140..... ....150.
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Query Sequence  GFVDTHIHYPQSEMVGAYGEQLLEWLNKHTFPTERRYEDLEYAREMSAFFIKQLLRNGTTTALVFGTVH. . . . . PQSVDA
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Template Sequence  GFIDQHVHLIGGGGEAGPTTRTP. . . . . . . . . . . . . . . . . . . . . . . . EVALSRLTEAGVTSVVGLLGTDSISRHPESLLA
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   63......70.........80..... ....90.........100.........110........
 
   152.......160.........170.........180.........190.........200.........210.........220.......
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Query Sequence  LFEAASHINMRMIAGKVMMDRNAPDYLLDTAESSYHQSKELIERWHKNGRLLYAITPRFAPTSSPEQMAMAQRLKE. . . .
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Template Sequence  KTRALNEEGISAWMLTGAYHVPSRTITGSVEKDVA. . . . . . . . . IIDRVIGVCAISDHRSAAPDVYHLANMAAESRVGGL
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   119120.........130.........140.........150... ......160.........170.........180.........
 
   228.230.........240.........250.........260.........270.........280.........290.........300......
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Query Sequence  . EYPDTWVHTHLCENKDEIAWVKSLYPDHDGYLDVYHQYGLTGKNCVFAHCVHLEEKEWDRLSETKSSIAFCPTSNLYLG
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Template Sequence  LGGKPGVTVFHMGDSKKALQPIYDLLENCDVPISKLLP. . . . . . . . THVNRNVPLFEQALEFARKGGTIDITSSIDEPVA
Template Known Secondary structure  TS

B
S
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   191........200.........210.........220........ .230.........240.........250.........260..
 
   307..310.........320 .........330.........340.........350.........360.........370........
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Query Sequence  SGLFNLKKAWQKKV. . . KVGMGTDIGAGTTFNMLQTLNEAYKVLQLQGYRLSAYEAFYLATLGGAKSLGLDDLIG
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Template Sequence  P. AEGIARAVQAGIPLARVTLSSDGNGSGVAGF. . ETLLETVQVLVKDYDFSISDALRPLTSSVAGFLNLTGK. G
Template Known Secondary structure  .TT

GGG

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   263 ......270.........280.........290.... .....300.........310.........320.........330.. .
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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