Job Description P76641 Confidence 99.00% Date Thu Jan 5 12:25:13 GMT 2012 Rank 114 Aligned Residues 259 % Identity 15% Template d1m7ja3 SCOP info TIM beta/alpha-barrel Metallo-dependent hydrolases D-aminoacylase, catalytic domain Resolution 1.50

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		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	F	V	D	T	H	I	H	Y	P	Q	S	E	M	V	G	A	Y	G	E	Q	L	L	E	W	L	N	K	H	T	F	P	T	E	R	R	Y	E	D	L	E	Y	A	R	E	M	S	A	F	F	I	K	Q	L	L	R	N	G	T	T	T	A	L	V	F	G	T	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	F	I	D	S	H	T	H	D	D	N	Y	L	L	K	H	R	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	T	P	K	I	S	Q	G	V	T	T	V	V	T	G	N	C	G	I	S	L	A	P	L	A	H	A	N	P	P
Template Known Secondary structure						S	S				T	T						T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						T	T	T							S		T	T			S		S				S	S
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.																																	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
													144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.						170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	V	H	P	Q	S	V	D	A	L	F	E	A	A	S	H	I	N	M	R	M	I	A	G	K	V	M	.	.	.	.	.	M	D	R	N	A	P	D	Y	L	L	D	T	A	E	S	S	Y	H	Q	S	K	E	L	I	E	R	W	H	K	N	G	R	L	L	Y	A	I	T
Query Conservation		.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.
Template Conservation
Template Sequence		A	P	L	D	L	L	D	E	G	G	S	F	R	F	A	R	F	S	D	Y	L	E	A	L	R	A	A	P	P	A	V	N	A	A	C	M	V	G	H	S	T	L	R	A	A	V	M	P	D	L	R	R	E	A	T	A	D	E	I	Q	A	M	Q	A	L	A	D	D	A	L	A	S	G	A	I	G	I	S	T	G
Template Known Secondary structure		T	T	G	G	G	G		S	S	S					S	S											S			S	S																	S			S	S																					T
Template Predicted Secondary structure
Template SS confidence
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
		208	.	210	.	.	.	.			.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
Predicted Secondary structure									.	.																																																																				.	.	.	.
Query SS confidence									.	.																																																																				.	.	.	.
Query Sequence		P	R	F	A	P	T	S	.	.	S	P	E	Q	M	A	M	A	Q	R	L	K	E	E	Y	P	D	T	W	V	H	T	H	L	C	E	N	K	D	E	I	A	W	V	K	S	L	Y	P	D	H	D	G	Y	L	D	V	Y	H	Q	Y	G	L	T	G	K	N	C	V	F	A	H	C	V	H	L	E	.	.	.	.
Query Conservation									.	.																																																																				.	.	.	.
Alig confidence									.	.																																													.	.	.	.	.	.	.	.	.	.														.	.	.	.
Template Conservation																																																							.	.	.	.	.	.	.	.	.	.
Template Sequence		A	F	Y	P	P	A	A	H	A	S	T	E	E	I	I	E	V	C	R	P	L	I	T	H	G	G	V	Y	A	T	H	M	R	D	E	G	E	H	I	V	Q	A	L	E	E	T	F	R	I	G	R	E	L	.	.	.	.	.	.	.	.	.	.	D	V	P	V	V	I	S	H	H	K	V	M	G	K	L	N	F
Template Known Secondary structure		T	T	S	G	G	G	T	T											T						T								S		S	S	T	T																.	.	.	.	.	.	.	.	.	.	T	S						S					S	G	G	G	T
Template Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.	.
Template SS confidence
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.											.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
									282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.																																						.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	E	K	E	W	D	R	L	S	E	T	K	S	S	I	A	F	C	P	T	S	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	Y	L	G	S	G	L	F	N	L	K	K	A	W	Q
Query Conservation		.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	R	S	K	E	T	L	A	L	I	E	A	A	M	A	S	Q	D	V	S	L	D	A	Y	P	Y	V	A	G	S	T	M	L	K	Q	D	R	V	L	L	A	G	R	T	L	I	T	W	C	K	P	Y	P	E	L	S	G	R	D	L	E	E	I	A	A	E	R	G	K	S	K	Y	D	V	V	P	E	L	Q	P
Template Known Secondary structure		T	T															S								S		S										T	T	T	T	S	S								S	S		G	G	G	T	T		B								T	T	S											S
Template Predicted Secondary structure
Template SS confidence
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
		318	.	320	.	.																		.	.	.	.	.	.	.	330	.	.	.	.	.				.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.
Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.
Query SS confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.
Query Sequence		K	K	V	K	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	M	G	T	D	I	G	A	G	T	T	F	N	.	.	.	M	L	Q	T	L	N	E	A	Y	K	V	L	Q	L	Q	G	Y	R	L	S	A	Y	E	A	F	Y	L	A	T	L	G	G	A	K	S	L	G	L	D	D	L	I
Query Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.																																										.
Template Conservation																																																																																	.
Template Sequence		A	G	A	I	Y	F	M	M	D	E	P	D	V	Q	R	I	L	A	F	G	P	T	M	I	G	S	D	G	L	P	H	D	E	R	P	H	P	R	L	W	G	T	F	P	R	V	L	G	H	Y	S	R	D	L	G	L	F	P	L	E	T	A	V	W	K	M	T	G	L	T	A	A	K	F	G	L	A	E	R	.
Template Known Secondary structure																				S	T	T									T	T		S	S			T																	T		S	S								T	T	T								T		T	T		.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.
		378
Predicted Secondary structure
Query SS confidence
Query Sequence		G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		419

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions