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Job DescriptionP76641
Confidence100.00%DateThu Jan 5 12:25:13 GMT 2012
Rank47Aligned Residues350
% Identity20%Templatec3etkA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:uncharacterized metal-dependent hydrolase; PDBTitle: crystal structure of an uncharacterized metal-dependent2 hydrolase from pyrococcus furiosus
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8.10.........20.........30.........40.........50...... ...60.........70.........80......
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Query Sequence  LKAVRGSFIDVTRTIDNPEEIASALRFIEDGLLLIKQGKVEWFGEWENG. KHQIPDTIRVRDYRGKLIVPGFVDTHIHYP
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Template Sequence  MKALINGTIYTSFSPV. . . . . . . . . . . KKVSGLVISNERVLYAGDSSTALRIAELAGGEIIDLKGKFVMPAFFDSHLHLD
Template Known Secondary structure 
SSTT...........STT
T

TT


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   35....40.........50 .........60.........70.........80.........90.........100...
 
   87..90........
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Query Sequence  QSEMVGAYGEQL. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  ELGMSLEMVDLRGVKSMEELVERVKKGRGRIIFGFGWDQDELGRWPTREDLDVIDRPVFLYRRCFHVAVMNSKMIDLLNL
Template Known Secondary structure  TS
TT

ST

SSS
TS


TTSSS
TTSS


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   104.....110.........120.........130.........140.........150.........160.........170.........180...
 
   99100.........110.........120.........130.........140.........150.........160....
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Query Sequence  . . . . . . . . . . . . . . LEWLNKHTFPTERRYEDLEYAREMSAFFIKQLLRNGTTTALVFGTVHPQSVDALFEAASHINMRMI
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Template Sequence  KPSKDFDESTGIVRERALEESRKIINEKILTVKDYKHYIESAQEHLLSLGVHSVGFMS. VGEKALKALFELEREGRLKMN
Template Known Secondary structure 


TTTTTTTTS
TT.
TT


S
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   184.....190.........200.........210.........220.........230.........240. ........250.........260..
 
   165....170.........180.........190.........200........ .210.........220
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Query Sequence  AGKVMMDRNAPDYLLDTAESSYHQSKELIERWHKNGRLLYAITP. . . . . . . . . . . . . . . . . . . . . . . . RFAPTSSPEQMA
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Template Conservation       ............                                                               
Template Sequence  VFAYL. . . . . . . . . . . . SPELLDKLEELNLGKFEGRRLRIWGVKLFVDGSLGARTALLSEPYTDNPTTSGELVMNKDEIV
Template Known Secondary structure  ............
GGGT

S
SSS


TTTT
S

SS
BTTBTT




SS
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   263.... ..270.........280.........290.........300.........310.........320.........330
 
   221........230.........240.........250.........260.........270.........280.........290.........300
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Query Sequence  MAQRLKEEYPDTWVHTHLCENKDEIAWVKSLYPDHDGYLDVYHQYGLTGKNCVFAHCVHLEEKEWDRLSETKSSIAFCPT
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Template Sequence  EVIERAKPL. GLDVAVHAIGDKAVDVALDAFEEAEFSG. . . . . . . . . . . . . . RIEHASLVRDDQLERIKELKVRISAQPH
Template Known Secondary structure  GGG.T

STT


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B

T

T
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   331........ 340.........350.........360....... ..370.........380.........390.....
 
   301........310.. .......320.........330.........340.........350.........360.........370
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Query Sequence  SNLYLGSGLFNL. . . . . . . . . . KKAWQKKVKVGMGTDIGAGTTFNMLQTLNEAYKVLQLQGYRLSAYEAFYLATLGGAKS
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Template Sequence  FIVSDWWIVNRVGEERAKWAYRLKTLSSITKLGFSTDSPIEPADPWVSIDAAVNRYVVDPGERVSREEALHLYTHGSAQV
Template Known Secondary structure 
TTGGGB

S


TTTTS




SS
GGG


TT
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   396...400.........410.........420.........430.........440.........450.........460.........470.....
 
   371........380.........390.......
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Query Sequence  LGLDDLIGNFLPGKEADFVVMEPTATP
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Template Sequence  TLAEDL. GKLERGFRAEYIILDRDPLK
Template Known Secondary structure  TT
TT
.S

STTSB

SS
TT
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   476...480. ........490.........500.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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