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Job DescriptionP76641
Confidence100.00%DateThu Jan 5 12:25:13 GMT 2012
Rank35Aligned Residues356
% Identity20%Templatec3e74D_
PDB info PDB header:hydrolaseChain: D: PDB Molecule:allantoinase; PDBTitle: crystal structure of e. coli allantoinase with iron ions at2 the metal center
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   910.........20.........30.........40.........50.........60.........70.........80........
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Query Sequence  KAVRGSFIDVTRTIDNPEEIASALRFIEDGLLLIKQGKVEWFGEWENGKHQIPDTIRVRDYRGKLIVPGFVDTHIHYPQS
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Template Sequence  LIIKNGTVILENE. . . . . . . . . . . . . ARVVDIAVKGGKIAAIGQD. . . . . . LGDAKEVXDASGLVVSPGXVDAHTHIGY.
Template Known Secondary structure  S

SS
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TTS
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TT





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   5....10....... ..20.........30...... ...40.........50.........60....
 
   8990.........100.........110.........120.........130.........140... ......150.........160..
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Query Sequence  EMVGAYGEQLLEWLNKHTFPTERRYEDLEYAREMSAFFIKQLLRNGTTTALVFGT. . . . . . VHPQSVDALFEAASHINMR
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ETGTRAAAKGGITTXIEXPLNQLPATVDRASIELKFDAAKGKLTI
Template Known Secondary structure  ...................................TT
SSSSSS


STT

SS
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   74.....80.........90.........100.........110........
 
   163......170.........180... ......190.........200.......
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Query Sequence  MIAGKVMMDRNAPDYLLDTAE. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . SSYHQSKELIERWHKNGRLLYAIT
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Template Sequence  DAAQLGGLVSYNIDRLHELDEVGVVGFCFVRDVNDWQFFKGAQKLGELGQPVLVHCENALICDELGEEAKREGRVTAHDY
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TT
TTTT




B




T

B
S
T

S
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   119120.........130.........140.........150.........160.........170.........180.........190........
 
   208.210.........220.........230.........240.........250.........260.........270.........280.......
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Query Sequence  PRFAPTSSPEQMAMAQRLKEEYPDTWVHTHLCENKDEIAWVKSLYPDHDGYLDVYHQYGLTGKNCVFAHCVHLEEKEWDR
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Template Sequence  VASRPVFTEVEAIRRVLYLAKVAGCRLHVCHVSSPEGVEEVTR. . . . . . . . . . . ARQEGQDITCESCPHYFVLDTDQFEE
Template Known Secondary structure  TS
T





S...........TT




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   212.......220.........230.........240.........250.... .....260.........270.........280
 
   288.290.........300.........310.........320.........330 .........340.........350....
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Query Sequence  LSETKSSIAFCPTSNLYLGSGLFNLKKAWQKKVKVGMGTDIGA. . . . . . . . . . . . . GTTFNMLQTLNEAYKVLQLQGYRL
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Template Sequence  I. . . GTLAKCSPP. . IRDLENQKGXWEKLFNGEIDCLVSDHSPCPPEXKAGNIXKAWGGIAGLQSCXDVXFDEAVQKRGX
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GGG

SS
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TT
S



B



GGGS
S
TTTS


B

TTTTTTT

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   281 ........290 .........300.........310.........320.........330.........340.........350.....
 
   355....360.........370.........380.........390.........400.........410.........420.........430....
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Query Sequence  SAYEAFYLATLGGAKSLGLDDLIGNFLPGKEADFVVMEPTATPLQQLRYDNSVSLVDKLFVMMTLGDDRSIYRTYVDGRL
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Template Sequence  SLPXFGKLXATNAADIFGLQQK. GRIAPGKDADFVFIQPNSSYVLTNDDLEYRHKVSPYVGRTIGAR. . . ITKTILRGDV
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TT
TTS.SS

TTSB

SS



GGG

SSS


TTTT
S
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   356...360.........370....... ..380.........390.........400.........410.........420. ........430.
 
   435....
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Query Sequence  VYERN
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Template Sequence  IYDIE
Template Known Secondary structure  TT
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   432....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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