Job Description P76641 Confidence 94.28% Date Thu Jan 5 12:25:13 GMT 2012 Rank 155 Aligned Residues 267 % Identity 14% Template c3e2vA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:3'-5'-exonuclease; PDBTitle: crystal structure of an uncharacterized amidohydrolase from2 saccharomyces cerevisiae Resolution 1.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	V	D	T	H	I	H	Y	P	Q	S	E	M	V	G	A	Y	G	E	Q	L	L	E	W	L	N	K	H	T	F	P	T	E	R	R	Y	E	D	L	E	Y	A	R	E	M	S	A	F	F	I	K	Q	L	L	R	N	G	T	T	T	A	L	V	F	G	T	V	H	P	Q	S	V	D	A	L	F	E	A	A	S
Query Conservation
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Template Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Template Sequence		Y	Y	D	I	G	L	N	L	T	D	P	M	F	H	G	I	Y	N	G	K	Q	Y	H	P	A	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	V	K	L	L	E	R	A	A	Q	R	H	V	K	N	A	L	V	T	G	.	S	S	I	A	E	S	Q	S	A	I	E	L	V	S
Template Known Secondary structure									T	T	S	G	G	G	G	T			T	T				S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											T	T									.		S
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Template SS confidence
		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.																				.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.		.	.	.	.	.	.	90	.	.	.	.	.	.	.
		158	.	160					.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.															.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200							.	.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure					.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.
Query SS confidence					.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.
Query Sequence		H	I	N	.	.	.	.	M	R	M	I	A	G	K	V	M	M	D	R	N	A	P	D	Y	L	L	D	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	E	S	S	Y	H	Q	S	K	E	L	I	E	R	W	H	K	N	G	.	.	.	.	.	.	R	L	L	Y	A	I	T	P	R	F	A	P	T
Query Conservation					.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.
Alig confidence					.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.
Template Conservation
Template Sequence		S	V	K	D	L	S	P	L	K	L	Y	H	T	I	G	V	H	P	C	C	V	N	E	F	A	E	A	Y	N	E	S	L	Y	A	K	V	I	S	N	P	S	F	A	Q	G	K	L	K	E	L	Y	D	L	M	N	Q	Q	A	K	P	H	D	T	S	F	R	S	I	G	E	I	G	L	D	Y	D	R	F	H	Y
Template Known Secondary structure				T	T	T		S	S										G	G	G	G	G	G	G																T																				S	T	T		S											T	T		T	T	T
Template Predicted Secondary structure
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230								.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.											.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.
Query Sequence		S	S	P	E	Q	M	A	M	A	Q	R	L	K	E	E	Y	P	.	.	.	.	.	.	.	D	T	W	V	H	T	H	L	C	E	N	K	D	E	I	A	W	V	K	S	L	Y	.	.	.	.	.	.	.	.	.	.	P	D	H	D	G	Y	L	D	V	Y	H	Q	Y	G	L	T	G	K	N	C	V	F	A	H
Query Conservation																			.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	S	K	E	M	Q	K	V	F	F	E	E	Q	L	K	I	S	C	L	N	D	K	L	S	S	Y	P	L	F	L	H	M	R	S	A	C	D	D	F	V	Q	I	L	E	R	F	V	V	G	F	T	D	E	K	D	T	F	Q	L	Q	K	L	S	S	S	S	G	F	Y	K	F	H	P	D	R	K	L	V	V	H
Template Known Secondary structure		S																T	T	S	S					T	S								S																			S	S		T	T		G	G	G				T	T							T	T
Template Predicted Secondary structure
Template SS confidence
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
		277	.	.	280	.	.	.	.	.	.	.	.	.	290	.			.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
Predicted Secondary structure																	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		C	V	H	L	E	E	K	E	W	D	R	L	S	E	T	.	.	K	S	S	I	A	F	C	P	T	S	N	L	Y	L	G	S	G	L	F	N	L	K	K	A	W	Q	K	K	V	K	V	G	M	G	T	D	I	G	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.									.																			.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.																			.	.
Template Sequence		S	F	T	G	S	A	I	D	L	Q	K	L	L	N	L	S	P	N	I	F	I	G	V	N	G	.	C	S	L	R	T	E	E	N	L	A	V	V	K	Q	I	P	T	E	.	.	R	L	L	L	E	T	D	A	P	W	C	E	I	K	R	T	H	A	S	F	Q	Y	L	A	K	Y	Q	E	V	R	D	F	E	Y
Template Known Secondary structure		S																T	T							G	.	G	G	G	S	S									T	S		G	G	.	.	G							T	T	S					T	T	S	T	T											S				S
Template Predicted Secondary structure																											.																			.	.
Template SS confidence
		278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.		.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320			.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.
																												331	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	T	T	F	N	M	L	Q	T	L	N	E	A	Y	K	V	L	Q	L	Q	G	Y	R	L	S	A	Y	E	A	F	Y	L	A	T	L	G	G	A	K	S	L	G
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.
Template Conservation																																													.	.	.	.	.
Template Sequence		P	A	F	K	S	V	K	K	N	K	L	A	D	K	L	N	A	E	E	L	Y	M	V	K	G	R	N	E	P	C	N	M	E	Q	V	A	I	V	V	S	E	V	K	.	.	.	.	.	D	V	D	L	A	T	L	I	D	T	T	W	K	T	T	C	K	I	F	G
Template Known Secondary structure		S	S	S					G	G	G	S	G	G	G	T	T	S	S	S					T	T				G	G	G													.	.	.	.	.	T
Template Predicted Secondary structure																																													.	.	.	.	.
Template SS confidence
		355	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.						.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions