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Job DescriptionP76641
Confidence100.00%DateThu Jan 5 12:25:13 GMT 2012
Rank2Aligned Residues419
% Identity32%Templatec3e0lB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:guanine deaminase; PDBTitle: computationally designed ammelide deaminase
Resolution2.37 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   910.........20.........30.........40.... .....50........ .60.........70.........80..
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Query Sequence  KAVRGSFIDVTRTIDNPEEIASALRFIEDGLLLIKQ. GKVEWFGEWENGKH. . . . . QIPDTIRVRDYRGKLIVPGFVDTH
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Template Sequence  HIFRGTFVHSTWT. . . . . . . . CPMEVLRDHLLGVSDSGKIVFLEEASQQEKLAKEWCFKPCEIRELSHHEFFMPGLVDTH
Template Known Secondary structure  TT........
TTSBGGGTT

GGG


TT

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   11........20... ......30.........40.........50.........60.........70.........80..
 
   83......90.. .......100.........110.........120.........130.........140.........150.........160.
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Query Sequence  IHYPQSEMVG. AYGEQLLEWLNKHTFPTERRYEDLEYAREMSAFFIKQLLRNGTTTALVFGTVHPQSVDALFEAASHINM
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Template Sequence  IHASQYSFAGSSIDLPLLEWLTKYTFPAEHRFQNIDFAEEVYTRVVRRTLKNGTTTACYFATIHTDSSLLLADITDKFGQ
Template Known Secondary structure  GGGGGGTTS


S
TGGGSTTT

S
T
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   83......90.........100.........110.........120.........130.........140.........150.........160..
 
   162.......170..... ....180.........190.........200.........210.........220.........230.........240
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Query Sequence  RMIAGKVMMDRNAP. DYLLDTAESSYHQSKELIERWHKNGRLLYAITPRFAPTSSPEQMAMAQRLKEEYPDTWVHTHLCE
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Template Sequence  RAFVGKVCMDLNDTFPEYKETTEESIKETERFVSEMLQKNYSRVKPIVTPGNGVSETLMGELGNIAKTR. DLHIQSHISE
Template Known Secondary structure 

S

SSSTTS


TT

SS
SS

T.T
S
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   163......170.........180.........190.........200.........210.........220.........230. ........240.
 
   241........250.........260.........270.........280.........290.........300.........310.........320
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Query Sequence  NKDEIAWVKSLYPDHDGYLDVYHQYGLTGKNCVFAHCVHLEEKEWDRLSETKSSIAFCPTSNLYLGSGLFNLKKAWQKKV
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Template Sequence  NRDEVEAVKNLYPSYKNYTSVYDKNNLLTNKTVMAHGCYLSAEELNVFHERGASIAHCPNSNLSLSSGFLNVLEVLKHEV
Template Known Secondary structure  SSTTSSSTTT

STT
TT

T

TT




TT
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   242.......250.........260.........270.........280.........290.........300.........310.........320.
 
   321........330.........340........ .350.........360.........370.........380.........390....
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Query Sequence  KVGMGTDIGAGTTFNMLQTLNEAYKVLQ. . . . . . LQGYRLSAYEAFYLATLGGAKSLGLDDLIGNFLPGKEADFVVMEPT
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Template Sequence  KIGLGTDVAGGYSYSMLDAIRRAVMVSNILLINKVNEKSLTLKEVFRLATLGGSQALGLDGEIGNFEVGKEFDAILINPK
Template Known Secondary structure 


TTTS



TTSSSS


TTT
TTTSSS

TTSB


TT
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   322.......330.........340.........350.........360.........370.........380.........390.........400.
 
   395....400. ........410.........420.........430......
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Query Sequence  ATPLQQL. . . RYDNSVSLVDKLFVMMTLGDDRSIYRTYVDGRLVY
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Template Sequence  ASDSPIDLFYGDFFGDISEAVIQKFLYLGDDRNIEEVYVGGKQVV
Template Known Secondary structure 
TT
S



TTSSSS
GGGT

GGGTT
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   402.......410.........420.........430.........440......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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