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Job DescriptionP76641
Confidence100.00%DateThu Jan 5 12:25:13 GMT 2012
Rank34Aligned Residues370
% Identity18%Templatec3be7B_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:zn-dependent arginine carboxypeptidase; PDBTitle: crystal structure of zn-dependent arginine carboxypeptidase
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   910.........20.........30.........40.........50.........60.........70.........80........
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Query Sequence  KAVRGSFIDVTRTIDNPEEIASALRFIEDGLLLIKQGKVEWFGEWENGKHQIPDTIRVRDYRGKLIVPGFVDTHIHYPQS
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Template Sequence  FLIKSKGYLDIQTGE. . . . . . . . . . . IIKADLLIRNGKIAEIGKINT. . . . . . KDATVISIPDLILIPGLMDSHVHIVGN
Template Known Secondary structure 
S
TTT

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   6...10.........20 .........30.........40. ........50.........60........
 
   8990.........100.........110.........120.........130.........140....... ..150.........160......
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Query Sequence  EMVGAYGEQLLEWLNKHTFPTERRYEDLEYAREMSAFFIKQLLRNGTTTALVFGTVHPQ. . SVDALFEAASHINMRMIAG
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Template Sequence  DSKGEESIA. . . . . . . . . . . . . . . . DSSHMGTVWGVVNAEKTLMAGFTTVRNVGAANYADVSVRDAIERGVINGPTMLVS
Template Known Secondary structure 


SGGGTT................

TTTT


STTTTSS




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   6970....... ..80.........90.........100.........110.........120.........130..
 
   167..170.........180..... ....190.........200.........210..... ....220....
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Query Sequence  KVMMDRNAPDYLLDTAESS. . . . . . . . . . . YHQSKELIERWHKNGRLLYAITPRFAPTSS. . . . . . . . . . . PEQMAMAQR
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Template Conservation                                                                                  
Template Sequence  GPALGITGGHCDHNLLPPEFNYSSEGVVDSPWEARKMVRKNRKYGADLIKFCATGGVMSRNTDVNAKQFTLEEMKAIVDE
Template Known Secondary structure 
S
BB
TTSTTS


S
TTT



TTB

ST
S
B

SSSSS

TTSB
S
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   133......140.........150.........160.........170.........180.........190.........200.........210..
 
   225....230.........240.........250.........260.........270.........280.........290.........300....
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Query Sequence  LKEEYPDTWVHTHLCENKDEIAWVKSLYPDHDGYLDVYHQYGLTGKNCVFAHCVHLEEKEWDRLSETKSSIAFCPTSNLY
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Template Sequence  AHNHGMKVAAHAHGLIGIKAAIKAGVDSVEHASFIDDETIDMAIKNNTVLSMDIFVSDYILGEGAKAGIREESLNKERLV
Template Known Secondary structure  TT

ST
S
TT

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   213......220.........230.........240.........250.........260.........270.........280.........290..
 
   305....310.........320.........330.........340.........350.........360.........370.........380....
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Query Sequence  LGSGLFNLKKAWQKKVKVGMGTDIGAGTTFNMLQTLNEAYKVLQLQGYRLSAYEAFYLATLGGAKSLGLDDLIGNFLPGK
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Template Sequence  GKKQRENFMNAHRRGAIITFGTDAGIFDHGDNAKQFAYMV. . . . . . EWGMTPLEAIQASTIKTATLFGIENI. GQIKEGF
Template Known Secondary structure  T





BTTB
TTGGGG......TT

TTTT

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TTS
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   293......300.........310.........320.........330.. .......340.........350........ .360.....
 
   385....390.........400.........410.........420.........430........
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Query Sequence  EADFVVMEPTATPLQQLRYDNSVSLVDKLFVMMTLGDDRSIYRTYVDGRLVYER
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Template Sequence  DADIVGVIENPLANIRTL. . . . . . . . . . . . . . . . . . . . EEVAFVMKEGKVYKRR
Template Known Secondary structure  B

SS
TTT
GGGT....................TS

TT

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   366...370.........380... ......390.........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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