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Job DescriptionP76641
Confidence100.00%DateThu Jan 5 12:25:13 GMT 2012
Rank40Aligned Residues352
% Identity16%Templatec2vhlB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:n-acetylglucosamine-6-phosphate deacetylase; PDBTitle: the three-dimensional structure of the n-acetylglucosamine-2 6-phosphate deacetylase from bacillus subtilis
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   910.........20.........30.........40.........50.........60.........70.........80........
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Query Sequence  KAVRGSFIDVTRTIDNPEEIASALRFIEDGLLLIKQGKVEWFGEWENGKHQIPDTIRVRDYRGKLIVPGFVDTHIHYPQS
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Template Sequence  LLIKDIAIVTENE. . . . . . . . . . . . VIKNGYVGINDGKISTVSTERPKE. . . PYSKEIQAPADSVLLPGMIDIHIHGGYG
Template Known Secondary structure 
SS
............TTSS

SS...

S

TT


TT
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   5....10....... ..20.........30.........40. ........50.........60.........
 
   8990.........100.........110.........120.........130.........140.........150........
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Query Sequence  EMVGAYGEQLLEWLNKHTFPTERRYEDLEYAREMSAFFIKQLLRNGTTTALVFGTVHPQSVDALFEAASH. . . . . . . . . .
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Template Sequence  ADTMDASFSTL. . . . . . . . . . . . . . . . . . . . . . . . DIMSSRLPEEGTTSFLATTITQEHGNISQALVNAREWKAAEESSL
Template Known Secondary structure  GGG
S........................GGGGT

S

TTSGGG
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   70.........80 .........90.........100.........110.........120.....
 
   159160.........170.........180.........190.........200.........210.........220.........230...
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Query Sequence  . . . . . INMRMIAGKVMMDRNAPDYLLDTAESSYHQSKELIERWHKNGRLLYAITPRFAPTSSPEQMAMAQRLKEEYPDTW
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Template Sequence  LGAELLGIHLEGPFVSPKRAGAQPKEWIRPSDVELFKKWQQEAGGLIKIV. . . . . . . TLAPEEDQHFELIRHLKDESIIA
Template Known Secondary structure  SSS
SSS
GGG
TTS
GGG




TTT
.......
GGGSGGGTT
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   126...130.........140.........150.........160.........170..... ....180.........190........
 
   234.....240.........250. ........260.........270.........280.........290.........
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Query Sequence  VHTHLCENKDEIAWVKSL. . . . . . . . . . . . . . YPDHDGYLDVYHQYGLTGKNCVFAHCVHLEEKEWDRLSETKSSIAFCP
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Template Sequence  SMGHTDADSALLSDAAKAGASHMTHLYNAMSPFHHREPGVIGTALAHDGFVTELIADGIHSHPLAAKLAFLAKGSSKLIL
Template Known Secondary structure 
SB


TTSSTTTTB



SSS

TT

SSSSS

TTS
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   199200.........210.........220.........230.........240.........250.........260.........270........
 
   300.........310 .........320.........330.........340.........350.........360.........370...
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Query Sequence  TSNLYLGSGLF. . . . . . NLKKAWQKKVKVGMGTDIGAGTTFNMLQTLNEAYKVLQLQGYRLSAYEAFYLATLGGAKSLGL
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Template Sequence  ITDSMRAKGLKDGVYEFGGQSVTVRGRTALLSDGTLAGSILKMNEGARHMREFT. . . . . NCSWTDIANITSENAAKQLGI
Template Known Secondary structure 

B
TTTTS
STTTT
TT

B
SB


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   279280.........290.........300.........310.........320.........330.. .......340.........350...
 
   374.....380.........390.........400.........410.........420.........430.........
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Query Sequence  DDLIGNFLPGKEADFVVMEPTATPLQQLRYDNSVSLVDKLFVMMTLGDDRSIYRTYVDGRLVYERN
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Template Sequence  FDRKGSVTVGKDADLVIVSSDCE. . . . . . . . . . . . . . . . . . . . . . . . . . . . VILTICRGNIAFISK
Template Known Secondary structure  TTTSSS

TTSB


TT

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S
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   354.....360.........370...... ...380.........390.
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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