Job Description P76641 Confidence 100.00% Date Thu Jan 5 12:25:13 GMT 2012 Rank 8 Aligned Residues 376 % Identity 23% Template c2pajA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:putative cytosine/guanine deaminase; PDBTitle: crystal structure of an amidohydrolase from an environmental sample of2 sargasso sea Resolution 2.70 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	K	A	V	R	G	S	F	I	D	V	T	R	T	I	D	N	P	E	E	I	A	S	A	L	R	F	I	E	D	G	L	L	L	I	K	Q	G	K	V	E	W	F	G	E	W	E	N	G	K	H	Q	I	P	D	T	I	R	V	R	D	Y	R	G	K	L	I	V	P	G	F	V	D	T	H	I	H	Y	P
Query Conservation
Alig confidence																									.	.	.	.																								.	.	.	.	.
Template Conservation																									.	.	.	.																								.	.	.	.	.
Template Sequence		P	S	T	L	I	R	N	A	A	A	I	M	T	G	G	R	G	T	A	D	D	P	S	.	.	.	.	R	V	P	G	P	D	I	R	I	V	G	D	T	I	D	A	I	G	A	L	A	P	R	.	.	.	.	.	P	G	E	T	I	V	D	A	T	D	C	V	I	Y	P	A	W	V	N	T	H	H	H	L	F
Template Known Secondary structure									B	S			B					S	S	S	S	S		S	.	.	.	.	B										T	T						S	S					.	.	.	.	.	T	T							B	T														G	G
Template Predicted Secondary structure																									.	.	.	.																								.	.	.	.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.					.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.						.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.						.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure																																																															.	.	.	.	.
Query SS confidence																																																															.	.	.	.	.
Query Sequence		Q	S	E	M	V	G	A	Y	G	E	Q	L	L	E	W	L	N	K	H	T	F	P	T	E	R	R	Y	E	D	L	E	Y	A	R	E	M	S	A	F	F	I	K	Q	L	L	R	N	G	T	T	T	A	L	V	F	G	T	V	H	P	Q	.	.	.	.	.	S	V	D	A	L	F	E	A	A	S	H	I	N	M
Query Conservation																																																															.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.
Template Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	S	L	L	K	G	E	P	F	R	A	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	D	E	R	R	F	R	L	A	A	R	I	G	L	I	E	L	A	R	S	G	C	A	T	V	A	D	H	N	Y	V	Y	Y	P	G	M	P	F	D	S	S	A	I	L	F	E	E	A	E	K	L	G	L
Template Known Secondary structure		G	G	G			S				G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			T	T	T													T	T		S	S													T	T
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.																.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.								.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.					.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure															.	.	.	.	.	.	.																												.	.	.	.
Query SS confidence															.	.	.	.	.	.	.																												.	.	.	.
Query Sequence		R	M	I	A	G	K	V	M	M	D	R	N	A	.	.	.	.	.	.	.	P	D	Y	L	L	D	T	A	E	S	S	Y	H	Q	S	K	E	L	I	E	R	W	H	K	N	G	R	.	.	.	.	L	L	Y	A	I	T	P	R	F	A	P	T	S	S	P	E	Q	M	A	M	A	Q	R	L	K	E	E	Y	P
Query Conservation															.	.	.	.	.	.	.																												.	.	.	.
Alig confidence															.	.	.	.	.	.	.																												.	.	.	.																													.
Template Conservation																																																																																	.
Template Sequence		R	F	V	L	L	R	G	G	A	T	Q	T	R	Q	L	E	A	D	L	P	T	A	L	R	P	E	T	L	D	A	Y	V	A	D	I	E	R	L	A	A	R	Y	H	D	A	S	P	R	A	M	R	R	V	V	M	A	P	T	T	V	L	Y	S	I	S	P	R	E	M	R	E	T	A	A	V	A	R	R	L	.
Template Known Secondary structure											S				S		S	T	T	S		G	G	G																			T				S	T	T		S								T	T	T	T	T	S	S															T	.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure
Query SS confidence
Query Sequence		D	T	W	V	H	T	H	L	C	E	N	K	D	E	I	A	W	V	K	S	L	Y	P	D	H	D	G	Y	L	D	V	Y	H	Q	Y	G	L	T	G	K	N	C	V	F	A	H	C	V	H	L	E	E	K	E	W	D	R	L	S	E	T	K	S	S	I	A	F	C	P	T	S	N	L	Y	L	G	S	G	L	F
Query Conservation
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																						.	.	.	.
Template Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																						.	.	.	.
Template Sequence		G	L	R	M	H	S	H	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	G	K	S	P	V	A	F	C	G	E	H	D	W	L	G	S	D	V	W	Y	A	H	L	V	K	V	D	A	D	E	I	A	L	L	A	Q	T	G	T	G	V	A	H	C	P	Q	S	N	G	R	L	P	.	.	.	.
Template Known Secondary structure		T								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												T	T			S	T	T					S			S													T															.	.	.	.
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																						.	.	.	.
Template SS confidence
		242	.	.	.	.	.	.	.																250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.		.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.
Query SS confidence																								.
Query Sequence		N	L	K	K	A	W	Q	K	K	V	K	V	G	M	G	T	D	I	G	A	G	T	.	T	F	N	M	L	Q	T	L	N	E	A	Y	K	V	L	Q	L	Q	G	Y	R	L	S	A	Y	E	A	F	Y	L	A	T	L	G	G	A	K	S	L	G	L	D	D	L	I	G	N	F	L	P	G	K	E	A	D	F	V
Query Conservation																								.
Alig confidence		.																						.																.	.																												.
Template Conservation		.																																						.	.																												.
Template Sequence		.	V	R	E	M	A	D	A	G	V	P	V	S	I	G	V	D	G	A	A	S	N	E	A	A	D	M	I	S	E	V	H	M	T	W	L	A	Q	.	.	R	A	R	L	A	S	I	A	E	V	I	H	W	G	T	A	G	G	A	R	V	M	G	L	D	E	V	.	G	K	V	A	V	G	Y	A	A	D	I	A
Template Known Secondary structure		.		T	T					T														S			S													.	.			T												T								T		T	T	S	.	S			S	T	T	S	B
Template Predicted Secondary structure		.																																						.	.																												.
Template SS confidence
			321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.			.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.		.	.	.	.	.	390	.	.	.	.	.	.
		390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	M	E	P	T	A	T	P	L	Q	Q	L	R	Y	D	N	S	V	S	L	V	D	K	L	F	V	M	M	T	L	G	D	D	R	S	I	Y	R	T	Y	V	D	G	R	L	V	Y	E	R
Query Conservation
Alig confidence									.	.	.	.	.	.	.	.
Template Conservation									.	.	.	.	.	.	.	.
Template Sequence		V	Y	R	L	D	D	P	.	.	.	.	.	.	.	.	R	Y	F	G	L	H	D	P	A	I	G	P	V	A	S	G	G	R	P	S	V	M	A	L	F	S	A	G	K	R	V	V	V	D
Template Known Secondary structure							S	G	.	.	.	.	.	.	.	.	G	G	T	T		S	S	G	G	G					S		S										T	T						T
Template Predicted Secondary structure									.	.	.	.	.	.	.	.
Template SS confidence
		416	.	.	.	420	.	.									.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.