Phyre 2 alignment of P76641 with c2icsA

Job Description P76641
Confidence 100.00% Date Thu Jan 5 12:25:13 GMT 2012

Rank 45 Aligned Residues 362

% Identity 13% Template c2icsA_

PDB info PDB header:hydrolase Chain: A: PDB Molecule:adenine deaminase; PDBTitle: crystal structure of an adenine deaminase

Resolution 2.30 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	K	A	V	R	G	S	F	I	D	V	T	R	T	I	D	N	P	E	E	I	A	S	A	L	R	F	I	E	D	G	L	L	L	I	K	Q	G	K	V	E	W	F	G	E	W	E	N	G	K	H	Q	I	P	D	T	I	R	V	R	D	Y	R	G	K	L	I	V	P	G	F	V	D	T	H	I	H	Y	P	Q	S
Query Conservation
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.
Template Sequence	L	L	I	K	N	G	Q	T	V	N	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	X	P	V	E	I	A	I	K	E	K	K	I	A	A	V	A	A	T	I	S	G	S	.	.	.	.	A	K	E	T	I	H	L	E	P	G	T	Y	V	S	A	G	W	I	D	D	H	V	H	C	F	E	K
Template Known Secondary structure									T	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									T	T							S						.	.	.	.									T	T																T	T
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.
Template SS confidence
	7	.	.	10	.	.	.	.	.	.	.																	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.					40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.

	89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.			.	.	.	.	.
Predicted Secondary structure																																																																										.	.
Query SS confidence																																																																										.	.
Query Sequence	E	M	V	G	A	Y	G	E	Q	L	L	E	W	L	N	K	H	T	F	P	T	E	R	R	Y	E	D	L	E	Y	A	R	E	M	S	A	F	F	I	K	Q	L	L	R	N	G	T	T	T	A	L	V	F	G	T	V	H	P	Q	S	V	D	A	L	F	E	A	A	S	H	I	N	M	.	.	R	M	I	A	G
Query Conservation																																																																										.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.
Template Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence	X	A	L	Y	Y	D	Y	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	E	I	G	V	K	K	G	V	T	T	V	I	D	A	G	T	T	G	A	E	N	I	H	E	F	Y	D	L	A	Q	Q	A	K	T	N	V	F	G	L	V	N
Template Known Secondary structure	S	S	S	S					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				T	G	G	G	T								S	S	S		T	T	T										T	S	S	S
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
	67	.	.	70	.	.	.	.																															.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.

	167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	K	V	M	M	D	R	N	A	P	D	Y	L	L	D	T	A	E	S	S	Y	H	Q	S	K	E	L	I	E	R	W	H	K	N	G	R	L	L	Y	A	I	T	P	R	F	A	P	T	S	S	P	E	Q	M	A	M	A	Q	R	L	K	E	E	Y	P	D	T	W	V	H	T	H	L	C	E	N	K	D	E	I	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence	I	S	K	W	G	I	V	A	Q	D	E	L	A	D	L	S	K	V	Q	A	S	L	V	K	K	A	I	Q	E	L	P	D	F	V	V	G	I	A	R	X	S	R	T	V	I	G	D	N	G	I	T	P	L	E	L	A	K	Q	I	Q	Q	E	N	Q	E	I	P	L	X	V	H	I	G	S	A	P	P	H	L	D
Template Known Secondary structure	S	S	T	T	T	T	S	S	S		T	T	S	S	G	G	G														T	T	T								S					T	T		T	T												T	T	T	T									S	S	S	S
Template Predicted Secondary structure
Template SS confidence
	117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.

	247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	W	V	K	S	L	Y	P	D	H	D	G	Y	L	D	V	Y	H	Q	Y	G	L	T	G	K	N	C	V	F	A	H	C	V	H	L	E	E	K	E	W	D	R	L	S	E	T	K	S	S	I	A	F	C	P	T	S	N	L	Y	L	G	S	G	L	F	N	L	K	K	A	W	Q	K	K	V	K	V	G	M	G	T
Query Conservation
Alig confidence														.	.	.	.																																						.	.
Template Conservation														.	.	.	.																																						.	.
Template Sequence	E	I	L	A	L	X	E	K	G	D	V	L	T	.	.	.	.	H	C	F	N	G	K	E	N	G	I	L	D	Q	A	T	D	K	I	K	D	F	A	W	Q	A	Y	N	K	G	V	V	F	D	I	G	H	G	.	.	T	D	S	F	N	F	H	V	A	E	T	A	L	R	E	G	X	K	A	A	S	I	S	T
Template Known Secondary structure								T	T					.	.	.	.	S	T	T			S	T	T	S	S			T	T	T	T												T	T								T	.	.	T	T	S												T	T				S	B
Template Predicted Secondary structure														.	.	.	.																																						.	.
Template SS confidence
	198	.	200	.	.	.	.	.	.	.	.	.	210					.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.			.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.

	327	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	D	I	G	A	G	T	T	F	N	M	L	Q	T	L	N	E	A	Y	K	V	L	Q	L	Q	G	Y	R	L	S	A	Y	E	A	F	Y	L	A	T	L	G	G	A	K	S	L	G	L	D	D	L	I	G	N	F	L	P	G	K	E	A	D	F	V	V	M	E	P	T	A	T	P	L	Q	Q	L	R	Y	D	N	S
Query Conservation
Alig confidence										.																																									.
Template Conservation										.																																									.
Template Sequence	D	I	Y	I	R	N	R	E	N	.	G	P	V	Y	D	L	A	T	T	X	E	K	L	R	V	V	G	Y	D	W	P	E	I	I	E	K	V	T	K	A	P	A	E	N	F	H	L	T	Q	K	.	G	T	L	E	I	G	K	D	A	D	L	T	I	F	T	I	Q	A	E	E	K	T	L	T	D	S	N	G	L
Template Known Secondary structure		B							S	.	S	S															T									T	T	T							T	T		T	T	S	.	S	S			T	T	S	B																		T	T	S
Template Predicted Secondary structure										.																																									.
Template SS confidence
	272	.	.	.	.	.	.	.	280		.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320		.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.

	407	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	V	S	L	V	D	K	L	F	V	M	M	T	L	G	D	D	R	S	I	Y	R	T	Y	V	D	G	R	L	V	Y	E	R
Query Conservation
Alig confidence									.	.	.	.	.	.	.	.	.											.
Template Conservation									.	.	.	.	.	.	.	.	.											.
Template Sequence	T	R	V	A	K	E	Q	I	.	.	.	.	.	.	.	.	.	R	P	I	K	T	I	I	G	G	Q	.	I	Y	D	N
Template Known Secondary structure									.	.	.	.	.	.	.	.	.								T	T		.
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.											.
Template SS confidence
	350	.	.	.	.	.	.	.										.	.	360	.	.	.	.	.	.	.		.	.	370	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
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