Job Description P76641 Confidence 98.14% Date Thu Jan 5 12:25:13 GMT 2012 Rank 135 Aligned Residues 244 % Identity 12% Template c2gzxB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:putative tatd related dnase; PDBTitle: crystal structure of the tatd deoxyribonuclease mw0446 from2 staphylococcus aureus. northeast structural genomics consortium3 target zr237. Resolution 2.20 Å

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		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	V	D	T	H	I	H	Y	P	Q	S	E	M	V	G	A	Y	G	E	Q	L	L	E	W	L	N	K	H	T	F	P	T	E	R	R	Y	E	D	L	E	Y	A	R	E	M	S	A	F	F	I	K	Q	L	L	R	N	G	T	T	T	A	L	V	F	G	T	V	H	P	Q	S	V	D	A	L	F	E	A	A	S
Query Conservation
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Template Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Template Sequence		L	I	D	T	H	V	H	L	N	D	E	Q	Y	D	D	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	S	E	V	I	T	R	A	R	E	A	G	V	D	R	X	F	V	V	.	G	F	N	K	S	T	I	E	R	A	X	K	L	I	D
Template Known Secondary structure									T	T	S	G	G	G	T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											T	T								.			S
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.																														.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.		.	.	.	40	.	.	.	.	.	.	.	.	.	50	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.				.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure																																																												.	.	.
Query SS confidence																																																												.	.	.
Query Sequence		H	I	N	M	R	M	I	A	G	K	V	M	M	D	R	N	A	P	D	Y	L	L	D	T	A	E	S	S	Y	H	Q	S	K	E	L	I	E	R	W	H	K	N	G	R	L	L	Y	A	I	T	P	R	F	A	P	T	S	S	.	.	.	P	E	Q	M	A	M	A	Q	R	L	K	E	E	Y	P	D	T	W	V
Query Conservation																																																												.	.	.
Alig confidence											.	.	.	.	.																																													.	.	.
Template Conservation											.	.	.	.	.
Template Sequence		E	Y	D	F	L	Y	G	I	I	.	.	.	.	.	G	W	H	P	V	D	A	I	D	F	T	E	E	H	L	E	W	I	E	S	L	A	Q	H	P	K	V	I	G	I	G	E	X	G	L	D	Y	H	W	D	K	S	P	A	D	V	Q	K	E	V	F	R	K	Q	I	A	L	A	K	R	L	K	L	P	I	I
Template Known Secondary structure				T	T						.	.	.	.	.				G	G	G	G	G	G													T	T	S	T	T												S			S	S																				T
Template Predicted Secondary structure											.	.	.	.	.
Template SS confidence
		52	.	.	.	.	.	.	.	60						.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.		.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
Predicted Secondary structure																																																											.
Query SS confidence																																																											.
Query Sequence		H	T	H	L	C	E	N	K	D	E	I	A	W	V	K	S	L	Y	P	D	H	D	G	Y	L	D	V	Y	H	Q	Y	G	L	T	G	K	N	C	V	F	A	H	C	V	H	L	E	E	K	E	W	D	R	L	S	E	T	.	K	S	S	I	A	F	C	P	T	S	N	L	Y	L	G	S	G	L	F	N	L	K
Query Conservation																																																											.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Template Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	H	N	R	E	A	T	Q	D	C	I	D	I	L	L	E	E	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	E	E	V	G	G	I	X	H	S	F	S	G	S	P	E	I	A	D	I	V	T	N	K	L	N	F	Y	I	S	L	G	G	P	V	T	F	K	N	A	K	Q	P	K	E	V	A
Template Known Secondary structure						S												T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G	T					T	T			S											T	S								G	G	G	G		S	S
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.																.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.						.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.
Predicted Secondary structure																								.	.	.	.	.
Query SS confidence																								.	.	.	.	.
Query Sequence		K	A	W	Q	K	K	V	K	V	G	M	G	T	D	I	G	A	G	T	T	F	N	.	.	.	.	.	M	L	Q	T	L	N	E	A	Y	K	V	L	Q	L	Q	G	Y	R	L	S	A	Y	E	A	F	Y	L	A	T	L	G	G	A	K	S	L	G
Query Conservation																								.	.	.	.	.
Alig confidence					.																			.	.	.	.	.
Template Conservation					.
Template Sequence		K	H	V	.	S	X	E	R	L	L	V	E	T	D	A	P	Y	L	S	P	H	P	Y	R	G	K	R	N	E	P	A	R	V	T	L	V	A	E	Q	I	A	E	L	K	G	L	S	Y	E	E	V	C	E	Q	T	T	K	N	A	E	K	L	F	N
Template Known Secondary structure				S	.		G	G	G						B	T	T	B				T	T	S	T	T	S				G	G	G													T
Template Predicted Secondary structure					.
Template SS confidence
		192	.	.		.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions