Return to main results Retrieve Phyre Job Id

Job DescriptionP76641
Confidence100.00%DateThu Jan 5 12:25:13 GMT 2012
Rank24Aligned Residues397
% Identity14%Templatec1k1dF_
PDB info PDB header:hydrolaseChain: F: PDB Molecule:d-hydantoinase; PDBTitle: crystal structure of d-hydantoinase
Resolution3.01 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   910.........20.........30.........40.........50.........60.........70.........80........
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Query Sequence  KAVRGSFIDVTRTIDNPEEIASALRFIEDGLLLIKQGKVEWFGEWENGKHQIPDTIRVRDYRGKLIVPGFVDTHIHYPQS
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Template Conservation   

 

 
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Template Sequence  KIIKNGTIVTATD. . . . . . . . . . . . . TYEAHLLIKDGKIAMIGQNLE. . . . . EKGAEVIDAKGCYVFPGGIDPHTHLDMP
Template Known Secondary structure 
SS
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SSBSS

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TT


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   3......10..... ....20.........30...... ...40.........50.........60....
 
   8990.........100.... .....110.........120.........130.........140.........150.........160..
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Query Sequence  EMVGAYGEQLLEWLNK. . . . . . HTFPTERRYEDLEYAREMSAFFIKQLLRNGTTTALVFGTVHPQSVDALFEAASHINMR
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Template Sequence  LGGTVTKDDFESGTIAAAFGGTTTIIDFCLTNKGEPLKKAIETWHNKANGKAVIDYGFHLMISEITDDVLEELPKVLEEE
Template Known Secondary structure 
SSS

SS
TT


TTS
TTT
SS

S


SS
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   65....70.........80.........90.........100.........110.........120.........130.........140....
 
   163......170.........180....... ..190.........200.........210.........220....
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Query Sequence  MIAGKVMMDRNAPDYLLDTAESSYH. . . . . . . . . . . . . . . . . . QSKELIERWHKNGRLLYAITPRFAPTSSPEQMAMAQR
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Template Conservation                                                                                  
Template Sequence  GITSLVFMAYKNVFQADDGTLYCTLLAAKELGALVMVHAENGDVIDYLTKKALADGNTDPIYHALTRPPELEGEATGRAC
Template Known Secondary structure 


B

BSSSTTTTB

T
BB


TT

STTS
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   145....150.........160.........170.........180.........190.........200.........210.........220....
 
   225....230.........240.........250.........260.........270.........280.........290.........300....
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Query Sequence  LKEEYPDTWVHTHLCENKDEIAWVKSLYPDHDGYLDVYHQYGLTGKNCVFAHCVHLEEKEWDRLSETKSSIAFCPTSNLY
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Template Sequence  QLTELAGSQLYVVHVTCAQAVEK. . . . . . . . . . . IAEARNKGLDVWGETCPQYLVLDQSYLEKPNFEGAKYVWSPP. . LR
Template Known Secondary structure  T

S

S...........TT



GGGGTSSTTGGGGG

SS
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   226...230.........240........ .250.........260.........270.........280.........290 ..
 
   305....310.........320.........330........ .340.........350.........360.......
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Query Sequence  LGSGLFNLKKAWQKKVKVGMGTDIGAGTTFNMLQ. . . . . . . . . . . . . . . . . TLNEAYKVLQLQGYRLSAYEAFYLATLGG
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Template Conservation                
       
                                           

  


   
   
Template Sequence  EKWHQEVLWNALKNGQLQTLGSDQCSFDFKGQKELGRGDFTKIPNGGPIIEDRVSILFSEGVKKGRITLNQFVDIVSTRI
Template Known Secondary structure 
TTTSS



B



TTTTGGGGSS
GGGS


B

TTTTGGGTSS
T
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   293......300.........310.........320.........330.........340.........350.........360.........370..
 
   368.370.........380.........390.........400.........410.........420.........430.........
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Query Sequence  AKSLGLDDLIGNFLPGKEADFVVMEPTATPLQQLRYDNSVSLVDKLFVMMTLGDDRSIYRTYVDGRLVYERN
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Template Sequence  AKLFGLFPKKGTIVVGSDADLVIFDPNIERVISAETHHMAVDYNAFEGMKVTGE. . . PVSVLCRGEFVVRDK
Template Known Secondary structure  TT
TTTSS

STTSB



TTT

SSSS

TTTT
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   373......380.........390.........400.........410.........420...... ...430.........440.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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