Job Description P0AC62 Confidence 98.35% Date Thu Jan 5 11:17:17 GMT 2012 Rank 66 Aligned Residues 73 % Identity 15% Template c1yy7A_ PDB info PDB header:transcription Chain: A: PDB Molecule:stringent starvation protein a; PDBTitle: crystal structure of stringent starvation protein a (sspa),2 an rna polymerase-associated transcription factor Resolution 2.02 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	N	V	E	I	Y	T	K	E	T	C	P	Y	C	H	R	A	K	A	L	L	S	S	K	G	V	S	F	Q	E	L	P	I	D	G	N	A	A	K	R	E	E	M	I	K	R	S	G	R	T	T	V	P	Q	I	F	I	D	A	Q	H	I	G	G	C	D	D	L	Y	A	L	D	A	R
Query Conservation
Alig confidence																																					.
Template Conservation																																					.
Template Sequence		S	V	M	T	L	F	S	G	P	T	D	I	F	S	H	Q	V	R	I	V	L	A	E	K	G	V	S	V	E	I	E	Q	V	E	A	.	D	N	L	P	Q	D	L	I	D	L	N	P	Y	R	T	V	P	T	L	V	D	R	E	L	T	L	Y	E	S	R	I	I	M	E	Y	L	D	E
Template Known Secondary structure		S	S							T	T															T										T	.	T	S										T	T			S	S					T	T					S
Template Predicted Secondary structure																																					.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.		.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions