Job Description P60752 Confidence 99.90% Date Thu Jan 5 12:07:07 GMT 2012 Rank 62 Aligned Residues 275 % Identity 65% Template d1pf4a2 SCOP info ABC transporter transmembrane region ABC transporter transmembrane region ABC transporter transmembrane region Resolution 3.80

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	Q	T	F	R	R	L	W	P	T	I	A	P	F	K	A	G	L	I	V	A	G	V	A	L	I	L	N	A	A	S	D	T	F	M	L	S	L	L	K	P	L	L	D	D	G	F	G	K	T	D	R	S	V	L	V	W	M	P	L	V	V	I	G	L	M	I	L	R	G	I	T	S	Y	V	S	S	Y	C	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		W	Q	T	F	K	R	L	W	T	Y	I	R	L	Y	K	A	G	L	V	V	S	T	I	A	L	V	I	N	A	A	A	D	T	Y	M	I	S	L	L	K	P	L	L	D	E	G	F	G	N	A	E	S	N	F	L	R	I	L	P	F	M	I	L	G	L	M	F	V	R	G	L	S	G	F	A	S	S	Y	C	L
Template Known Secondary structure				S	T	T							T	S		S	S																											T	T	S	S		S					S
Template Predicted Secondary structure
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	W	V	S	G	K	V	V	M	T	M	R	R	R	L	F	G	H	M	M	G	M	P	V	S	F	F	D	K	Q	S	T	G	T	L	L	S	R	I	T	Y	D	S	E	Q	V	A	S	S	S	S	G	A	L	I	T	V	V	R	E	G	A	S	I	I	G	L	F	I	M	M	F	Y	Y	S	W	Q	L	S	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	W	V	S	G	N	V	V	M	Q	M	R	R	R	L	F	N	H	F	M	H	M	P	V	R	F	F	D	Q	E	S	T	G	G	L	L	S	R	I	T	Y	D	S	E	Q	V	A	G	A	T	S	R	A	L	V	S	I	V	R	E	G	A	S	I	I	G	L	L	T	L	M	F	W	N	S	W	Q	L	S	L
Template Known Secondary structure		T	T	T	G	G	G											T	T	T		S	S								T	T											G	G	G																T	T					G	G	G	G	G	G	S				S		T
Template Predicted Secondary structure
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L	I	V	L	A	P	I	V	S	I	A	I	R	V	V	S	K	R	F	R	N	I	S	K	N	M	Q	N	T	M	G	Q	V	T	T	S	A	E	Q	M	L	K	G	H	K	E	V	L	I	F	G	G	Q	E	V	E	T	K	R	F	D	K	V	S	N	R	M	R	L	Q	G	M	K	M	V	S	A	S	S
Query Conservation
Alig confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	L	I	V	V	A	P	V	V	A	F	A	I	S	F	V	S	K	R	F	R	K	I	S	R	N	M	Q	T	A	M	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	R	Q	Q	T	M	K	L	V	S	A	Q	S
Template Known Secondary structure				G	G	G								T	T	G	G	G	G												T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											G	G	G
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.																																				.	.	.	.	.	.	.	.	210	.	.	.	.
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	S	D	P	I	I	Q	L	I	A	S	L	A	L	A	F	V	L	Y	A	A	S	F	P	S	V	M	D	S	L	T	A	G	T	I	T	V	V	F	S	S	M	I	A	L	M	R	P	L	K	S	L	T	N	V	N	A	Q	F	Q	R	G	M	A	A	C	Q	T	L	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	A	D	P	V	I	Q	M	I	A	S	L	A	L	F	A	V	L	F	L	A	S	V	D	S	I	R	A	E	L	T	P	G	T	F	T	V	V	F	S	A	M	F	G	L	M	R	P	L	K	A	L	T	S	V	T	S	E	F	Q	R	G	M	A	A	C	Q	T	L	F
Template Known Secondary structure		G										T	T							G	G	G	G	T	S	S															G	G	G	G	G	G	T	T	T	T	T	G	G	G	G	G	S	S							T
Template Predicted Secondary structure
Template SS confidence
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions