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Job DescriptionP60752
Confidence99.90%DateThu Jan 5 12:07:07 GMT 2012
Rank62Aligned Residues275
% Identity65%Templated1pf4a2
SCOP infoABC transporter transmembrane region ABC transporter transmembrane region ABC transporter transmembrane region
Resolution3.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  WQTFRRLWPTIAPFKAGLIVAGVALILNAASDTFMLSLLKPLLDDGFGKTDRSVLVWMPLVVIGLMILRGITSYVSSYCI
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Template Sequence  WQTFKRLWTYIRLYKAGLVVSTIALVINAAADTYMISLLKPLLDEGFGNAESNFLRILPFMILGLMFVRGLSGFASSYCL
Template Known Secondary structure 

STTTS
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Query Sequence  SWVSGKVVMTMRRRLFGHMMGMPVSFFDKQSTGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMMFYYSWQLSI
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Template Sequence  SWVSGNVVMQMRRRLFNHFMHMPVRFFDQESTGGLLSRITYDSEQVAGATSRALVSIVREGASIIGLLTLMFWNSWQLSL
Template Known Secondary structure  TTTGGGTTT
SSTT



GGGTTGGGGGGS


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Query Sequence  ILIVLAPIVSIAIRVVSKRFRNISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNRMRLQGMKMVSASS
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Template Sequence  VLIVVAPVVAFAISFVSKRFRKISRNMQTAMG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . HRQQTMKLVSAQS
Template Known Secondary structure  GGGTTGGGGTT
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GGG
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Query Sequence  ISDPIIQLIASLALAFVLYAASFPSVMDSLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLF
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Template Sequence  IADPVIQMIASLALFAVLFLASVDSIRAELTPGTFTVVFSAMFGLMRPLKALTSVTSEFQRGMAACQTLF
Template Known Secondary structure  GTTGGGGTSS




GGGGGGTTTTTGGGGGSST





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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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