Job Description P60752 Confidence 96.32% Date Thu Jan 5 12:07:07 GMT 2012 Rank 134 Aligned Residues 117 % Identity 17% Template c3cmvG_ PDB info PDB header:recombination Chain: G: PDB Molecule:protein reca; PDBTitle: mechanism of homologous recombination from the reca-2 ssdna/dsdna structures Resolution 4.30 Å

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		366	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	P	A	G	K	T	V	A	L	V	G	R	S	G	S	G	K	S	T	I	A	S	L	I	T	R	F	Y	D	I	D	E	G	E	I	L	M	D	G	H	D	L	R	E	Y	T	L	A	S	L	R	N	Q	V	A	L	V	S	Q	N	V	H	L	F	N	D	T	V	A	N	N	I	A	Y	A	R	T	E	Q	Y
Query Conservation
Alig confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	P	M	G	R	I	V	E	I	Y	G	P	E	S	S	G	K	T	T	L	T	L	Q	V	I	A	A	A	Q	R	E	G	K	T	C	A	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	D	A	E	H	A	L
Template Known Secondary structure				T	T	S								T	T	S	S														T	T	S						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T	S
Template Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		3056	.	.	.	3060	.	.	.	.	.	.	.	.	.	3070	.	.	.	.	.	.	.	.	.	3080	.	.	.	.	.	.	.	.	.	3090	.	.																																					.	.	.	.	.	.	.
		446	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.							.	.	.
Predicted Secondary structure																																																																									.	.	.	.	.	.
Query SS confidence																																																																									.	.	.	.	.	.
Query Sequence		S	R	E	Q	I	E	E	A	A	R	M	A	Y	A	M	D	F	I	N	K	M	D	N	G	L	D	T	V	I	G	E	N	G	V	L	L	S	G	G	Q	R	Q	R	I	A	I	A	R	A	L	L	R	D	S	P	I	L	I	L	D	E	A	T	S	A	L	D	T	E	S	E	.	.	.	.	.	.	R	A	I
Query Conservation																																																																									.	.	.	.	.	.
Alig confidence										.	.														.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.
Template Conservation										.	.														.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	P	I	Y	A	R	K	L	.	.	G	V	D	I	D	N	L	L	C	S	Q	P	D	.	.	.	.	.	.	.	.	.	.	.	.	.	T	G	E	Q	A	L	E	I	C	D	A	L	A	R	S	G	A	V	D	V	I	V	V	D	S	V	A	A	L	T	P	L	A	A	R	M	M	S	Q	A	M	R	K	L
Template Known Secondary structure										.	.	T			G	G	G				B			S	.	.	.	.	.	.	.	.	.	.	.	.	.	S														S	S	S							T	T	G	G	G					T	T	T	T
Template Predicted Secondary structure										.	.														.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		3100	.	.	.	.	.	.	.			.	.	3110	.	.	.	.	.	.	.	.	.	3120														.	.	.	.	.	.	.	.	.	3130	.	.	.	.	.	.	.	.	.	3140	.	.	.	.	.	.	.	.	.	3150	.	.	.	.	.	.	.	.	.	3160	.	.	.	.
		520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	A	A	L	D	E	L	Q	K	N	R	T	S	L	V	I
Query Conservation
Alig confidence									.	.
Template Conservation									.	.
Template Sequence		A	G	N	L	K	Q	S	.	.	N	T	L	L	I	F	I
Template Known Secondary structure									.	.
Template Predicted Secondary structure									.	.
Template SS confidence
		3179	3180	.	.	.	.	.			.	.	.	.	3190	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions