Job Description P60752 Confidence 100.00% Date Thu Jan 5 12:07:07 GMT 2012 Rank 15 Aligned Residues 250 % Identity 18% Template c2r6fA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:excinuclease abc subunit a; PDBTitle: crystal structure of bacillus stearothermophilus uvra Resolution 3.20 Å

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		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	S	E	Q	E	K	D	E	G	K	R	V	I	E	R	A	T	G	D	V	E	F	R	N	V	T	F	T	Y	P	G	R	D	V	P	A	L	R	N	I	N	L	K	I	P	A	G	K	T	V	A	L	V	G	R	S	G	S	G	K	S	T	I	A	S	L	I	T	R	F	Y	D	I	D	E	G	E	I	L	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	E	H	L	D	K	V	I	D	I	D	Q	S	P	I	G	R	T	P	R	S	N	P	A	T	Y	T	G	V	F	D	D	I	R	D	V	F	A	S	T	N	E	A	K	V	R	G	Y	K	K	G	R	F	S	F	N	V	K	G	G	R	C	E	A	C	H	G	D	G	I	I	K	I	E	X	H	F	L	P	D
Template Known Secondary structure		G	G	G		S							S	S		S		S	S	T	T								T											T	S						T	T			T	T	T	T		T	T	S	T	T	T	B		T	T	T	T	T		S							S	S	S
Template Predicted Secondary structure
Template SS confidence
		675	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.
		403	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	G	H	D	L	R	E	Y	T	L	A	S	L	R	N	Q	V	A	L	V	S	Q	N	V	H	L	F	N	D	T	V	A	N	N	I	A	Y	A	R	T	E	Q	Y	S	R	E	Q	I	E	E	A	A	R	M	A	Y	A	M	D	F	I	N	K	M	D	N	G	L	D	T	V	I	G	E	N	G	V	L	L	S
Query Conservation
Alig confidence											.	.	.	.																											.	.																														.
Template Conservation											.	.	.	.																											.	.																														.
Template Sequence		V	Y	V	P	C	E	V	C	H	.	.	.	.	G	K	R	Y	N	R	E	T	L	E	V	T	Y	K	G	K	N	I	A	E	V	L	D	X	T	V	.	.	E	D	A	L	D	F	F	A	S	I	P	K	I	K	R	K	L	E	T	L	Y	D	V	G	L	G	Y	X	K	.	L	G	Q	P	A	T	T	L	S
Template Known Secondary structure							T	T	T	T	.	.	.	.	T			B		T	T	G	G	G			B	T	T	B							T	S	B		.	.							T		S														T	T		S	S	S	B	.	T	T			G	G	G
Template Predicted Secondary structure											.	.	.	.																											.	.																														.
Template SS confidence
		755	.	.	.	.	760	.	.	.					.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.			790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.		.	820	.	.	.	.	.	.	.
		483	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500				.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.		.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.							.
Predicted Secondary structure																				.	.	.																										.																											.	.	.	.	.	.
Query SS confidence																				.	.	.																										.																											.	.	.	.	.	.
Query Sequence		G	G	Q	R	Q	R	I	A	I	A	R	A	L	L	R	D	S	P	.	.	.	I	L	I	L	D	E	A	T	S	A	L	D	T	E	S	E	R	A	I	Q	A	A	L	D	E	.	L	Q	K	N	R	T	S	L	V	I	A	H	R	L	S	T	I	E	K	A	D	E	I	V	V	V	.	.	.	.	.	.	E
Query Conservation																				.	.	.																										.																											.	.	.	.	.	.
Alig confidence																				.	.	.																										.																											.	.	.	.	.	.
Template Conservation
Template Sequence		G	G	E	A	Q	R	V	K	L	A	A	E	L	H	R	R	S	N	G	R	T	L	Y	I	L	D	E	P	T	T	G	L	H	V	D	D	I	A	R	L	L	D	V	L	H	R	L	V	D	N	G	D	T	V	L	V	I	E	H	N	L	D	V	I	K	T	A	D	Y	I	I	D	L	G	P	E	G	G	D	R
Template Known Secondary structure															S	S				S									T	T	T	T																			T	T														T	T		S							S	S	S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		828	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.
		553	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.						.	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.
Query SS confidence																						.	.	.	.	.
Query Sequence		D	G	V	I	V	E	R	G	T	H	N	D	L	L	E	H	R	G	V	Y	.	.	.	.	.	A	Q	L	H	K	M	Q
Query Conservation																						.	.	.	.	.
Alig confidence																						.	.	.	.	.
Template Conservation
Template Sequence		G	G	Q	I	V	A	V	G	T	P	E	E	V	A	E	V	K	E	S	H	T	G	R	Y	L	K	P	I	L	E	R	D
Template Known Secondary structure				S						S						T		T	T
Template Predicted Secondary structure
Template SS confidence
		908	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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