Job Description P60752 Confidence 96.31% Date Thu Jan 5 12:07:07 GMT 2012 Rank 135 Aligned Residues 154 % Identity 12% Template c1szpC_ PDB info PDB header:dna binding protein Chain: C: PDB Molecule:dna repair protein rad51; PDBTitle: a crystal structure of the rad51 filament Resolution 3.25 Å

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		366	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	P	A	G	K	T	V	A	L	V	G	R	S	G	S	G	K	S	T	I	A	S	L	I	T	R	F	Y	D	I	D	E	G	E	I	L	M	D	G	H	D	L	R	E	Y	T	L	A	S	L	R	N	Q	V	A	L	V	S	Q	N	V	H	L	F	N	D	T	V	A	N	N	I	A	Y	A	R	T	E	Q	Y
Query Conservation
Alig confidence																																										.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	E	T	G	S	I	T	E	L	F	G	E	F	R	T	G	K	S	Q	L	C	H	T	L	A	V	T	C	Q	I	P	L	D	I	G	G	G	E	G	K	.	.	.	.	.	.	.	.	.	.	.	.	.	C	L	Y	I	D	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	G	T	F
Template Known Secondary structure				S	S	S							S	T	T	S	S												T	T	S		T	T	T	T			S	S		.	.	.	.	.	.	.	.	.	.	.	.	.						S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S
Template Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.														.	.	.	.	.	220																		.	.	.	.
		446	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.			.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.						.	.
Predicted Secondary structure																																																						.	.																				.	.	.	.	.
Query SS confidence																																																						.	.																				.	.	.	.	.
Query Sequence		S	R	E	Q	I	E	E	A	A	R	M	A	Y	A	M	D	F	I	N	K	M	D	N	G	L	D	T	V	I	G	E	N	G	V	L	L	S	G	G	Q	R	Q	R	I	A	I	A	R	A	L	L	R	.	.	D	S	P	I	L	I	L	D	E	A	T	S	A	L	D	T	E	S	E	.	.	.	.	.	R	A
Query Conservation																																																						.	.																				.	.	.	.	.
Alig confidence																		.	.	.	.	.	.																															.	.																				.	.	.	.	.
Template Conservation																		.	.	.	.	.	.
Template Sequence		R	P	V	R	L	V	S	I	A	Q	R	F	G	L	D	P	.	.	.	.	.	.	D	D	A	L	N	N	V	A	Y	A	R	A	Y	N	A	D	H	Q	L	R	L	L	D	A	A	A	Q	M	M	S	E	S	R	F	S	L	I	V	V	D	S	V	M	A	L	Y	R	E	L	S	A	R	Q	M	H	L	A	K
Template Known Secondary structure			G	G	G	G							T					.	.	.	.	.	.				G	G	G								S	T	T									T							S										T	T	G	G	G			T
Template Predicted Secondary structure																		.	.	.	.	.	.
Template SS confidence
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240							.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
		519	520	.	.	.	.	.	.	.	.			.	530	.	.	.	.	.	.	.			.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.
Predicted Secondary structure												.	.										.	.
Query SS confidence												.	.										.	.
Query Sequence		I	Q	A	A	L	D	E	L	Q	K	.	.	N	R	T	S	L	V	I	A	H	.	.	R	L	S	T	I	E	K	A	D	E	I	V	V	V	E	D	G	V
Query Conservation												.	.										.	.
Alig confidence												.	.										.	.
Template Conservation
Template Sequence		F	M	R	A	L	Q	R	L	A	D	Q	F	G	V	A	V	V	V	T	N	Q	V	G	G	N	I	M	A	H	S	S	T	T	R	L	G	F	K	K	G	K
Template Known Secondary structure																																	S									S
Template Predicted Secondary structure
Template SS confidence
		306	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions