|   |
14 | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | |
|
. | . | . | . | . | . | . | . | 40 | . | . | . | |
. | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |
|
| . |
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | A | Q | Q | L | L | L | L | F | H | G | V | G | D | N | P | V | A | . |
. |
M | G | E | I | G | N | W | F | A | P | L | F | . |
P | D | A | L | V | V | S | V | G | G | A | E | P | S | G | N | P | A | G | R | Q | W | F | S | V | Q | G | I | T | E | D | N | R | Q | A | R | V | D | A | I | M | P | T | F | I | E | T |
Query Conservation |   |
  |   |   |   |   |
|
|   |
|
|
|   |
|   |   |   |   |   | . | . |   |   |   |   |   |   |   |
|
|   |   |   | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|
|   |
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |   |   |
|   |
|
|
|   |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|   |   |   |
|   |   |   |
|   |   |
|   |   |
|   |   |   |
|
|   |   |
|
|   |   |
Template Sequence |   |
T | D | K | K | T | R | F | I | I | H | G | F | I | D | K | G | E | E | N | W | L | L | D | M | C | K | N | M | F | K | V | E | E | V | N | C | I | C | V | D | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
W | K | K | G | S | Q | T | S | Y | T | Q | A | A | N | N | V | R | V | V | G | A | Q | V | A | Q | M |
Template Known Secondary structure |   |
T | T | S |  |  |  |  |  |  |
|
|
|
|
| T | T |
| T | T |  |  |  |  |  |  |  |  |  | T | T | T |
|
|  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|  |  |  |  | S | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
66 | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . |
  |
  |   |
91 | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | |
|
|
|
|
|
|
. | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  | . | . | . | . | . | . | . |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | R | Y | W | Q | K | Q | S | G | V | G | A | N | A | T | A | L | I | G | F | S | Q | G | A | I | M | V | L | E | S | I | K | A | E | P | G | L | A | S | R | V | I | A | F | . |
. |
. |
. |
. |
. |
. |
N | G | R | Y | A | S | L | P | E | T | A | S | T | A | T | T | I | H | L | I | H | G | G | E | D | P | V | I | D |
Query Conservation |   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |
|   |
|   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |   |
|
|   |   |
|   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|   |   |   |   |
|   |   |   |   |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |   |
|
|   |   |   |   |   |   |   |
|
|
|
|
|
|
|
|   |
|   |
|   |   |   |   |   |   |   |
|
|
|   |   |
|
|   |
|
|
|
|
|
|
|   |   |   |   |
|   |   |
Template Sequence |   |
L | S | M | L | S | A | N | Y | S | Y | S | P | S | Q | V | Q | L | I | G | H | S | L | G | A | H | V | A | G | . |
E | A | G | S | R | T | P | G | L | G | R | I | T | G | L | D | P | V | E | A | S | F | Q | G | T | P | E | E | V | R | L | D | P | T | D | A | D | F | V | D | V | I | H | T | D | A | A | P | L | I | P |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
| G | G | G |  |  |  |  |  |  | T |  |  |  |  |  |  |  | . |  |  |  |  | T | S | T | T |
|
|  |  |  |  |  | S |
|
|
| T | T | T | T | T | S |
| T | T | T | S |
|
| G | G | G | S | S |  |  |  |  |  |
| S |
|
| S |
|  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  | . |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
132 | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | |
160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 |
  |
  |   |
164 |
Predicted Secondary structure |   |
 |
Query SS confidence |   |
|
Query Sequence |   |
L |
Query Conservation |   |
  |
Alig confidence |   |
|
Template Conservation |   |
  |
Template Sequence |   |
F |
Template Known Secondary structure |   |
 |
Template Predicted Secondary structure |   |
|
Template SS confidence |   |
|
  |   |
212 |
  |