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Job DescriptionP76561
Confidence99.76%DateThu Jan 5 12:24:39 GMT 2012
Rank70Aligned Residues195
% Identity16%Templated1hlga_
SCOP infoalpha/beta-Hydrolases alpha/beta-Hydrolases Gastric lipase
Resolution3.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30.... .....40.........50.........60.........70........
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Query Sequence  HFVVQSPDKPAQQLLLLFHGVGDNPVAMGE. . . . . . IGNWFAPLFPDALVVSVGGAEPSGNPAGRQWFSVQGITEDNRQA
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Template Sequence  RIPYGKKNSGQRPVVFLQHGLLASATNWISNLPNNSLAFILADAGYDVWLGNSRGNTWARRNLY. . . . YSPDSVEFWAFS
Template Known Secondary structure 
S
SSTT





TT

GGGGGSS
TTS
TT



TTSTT


BSS....S
TTSTGGG


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   44.....50.........60.........70.........80.........90.........100....... ..110.........
 
   7980.........90.........100.........110.........120.........130.........140....
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Query Sequence  RVDAIMPTFIETVRYWQKQSGVGANATALIGFSQGAIMVLESIKAEPGLASRVIAFNGRYASLPET. . . . . . . . . . . . . .
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Template Sequence  FDEMAKYDLPATIDFIVKKTGQK. . QLHYVGHSQGTTIGFIAFSTNPSLAKRIKTFYALAPVATVKYTKSLINKLRFVPQ
Template Known Secondary structure  T

S..
T
TTS

S

SS

SGGGGGGG

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   123......130.........140..... ....150.........160.........170.........180.........190.........200
 
  
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation  ................................................................................
Template Conservation                                                                                  
Template Sequence  SLFKFIFGDKIFYPHNFFDQFLATEVCSREMLNLLCSNALFIICGFDSKNFNTSRLDVYLSHNPAGTSVQNMFHWTQAVK
Template Known Secondary structure 
SSB


TTTTTTSS
T




TTS
GGGTT

S

B
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   201........210.........220.........230.........240.........250.........260.........270.........280
 
   145....150.........160.........170.........180.........190.
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ASTATTIHLIHGGEDPVIDLAHAVAAQEALISAGGDVTLDIVEDLGH. . . .
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Template Sequence  SGKFQAYDWGSPVQNRMHYDQSQPPYYNVTAMNVPIAVWNGGKDLLADPQDVGLLLPKLPNL. . . IYHKEIPFYNHLDFI
Template Known Secondary structure 
S
B



SSSSSS

B

GGG

S
TT
SSS

TT...TT

TT
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   281........290.........300.........310.........320.........330.........340.. .......350.......
 
   192.......200........
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Query Sequence  . . . AIDNRSMQFALDHLRYT
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Template Conservation          
   
  

   
Template Sequence  WAMDAPQEVYNDIVSMISED
Template Known Secondary structure 
TTTTTT
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   358.360.........370.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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