Job Description P76561 Confidence 99.79% Date Thu Jan 5 12:24:39 GMT 2012 Rank 59 Aligned Residues 183 % Identity 16% Template c3mveB_ PDB info PDB header:lyase Chain: B: PDB Molecule:upf0255 protein vv1_0328; PDBTitle: crystal structure of a novel pyruvate decarboxylase Resolution 2.20 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.		.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure																													.
Query SS confidence																													.
Query Sequence		H	F	V	V	Q	S	P	D	K	P	A	Q	Q	L	L	L	L	F	H	G	V	G	D	N	P	V	A	.	M	G	E	I	G	N	W	F	A	P	L	F	P	D	A	L	V	V	S	V	G	G	A	E	P	S	G	N	P	A	G	R	Q	W	F	S	V	Q	G	I	T	E	D	N	R	Q	A	R	V	D	A	I
Query Conservation																													.
Alig confidence												.																	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	L	H	L	T	N	T	D	K	P	.	H	P	V	V	I	V	S	A	G	L	D	S	L	Q	T	D	M	W	R	L	F	R	D	H	L	A	K	H	D	I	A	M	L	T	V	D	M	P	S	V	G	Y	S	S	K	Y	P	L	T	E	D	Y	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure						S		S	S	S		.										T	T	S		G	G	G							T	T	G	G	G	G	T									T	T	S	G	G	G	T	T	S				S		T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure												.																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		183	.	.	.	.	.	.	190	.	.		.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	P	T	F	I	E	T	V	R	Y	W	Q	K	Q	S	G	V	G	A	N	A	T	A	L	I	G	F	S	Q	G	A	I	M	V	L	E	S	I	K	A	E	P	G	L	A	S	R	V	I	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.
Template Sequence		.	R	L	H	Q	A	V	L	N	E	L	F	S	I	P	Y	V	D	H	H	R	V	G	L	I	G	F	R	F	G	G	N	A	M	V	R	L	S	F	L	E	Q	E	K	I	K	A	C	V	I	L	G	A	P	I	H	D	I	F	A	S	P	Q	K	L	Q	Q	M	P	K	M	Y	L	D	V	L	A	S	R	L
Template Known Secondary structure		.										G	G	G		T	T												T													T	G	G	G								S				S										T	T	S												T
Template Predicted Secondary structure		.
Template SS confidence
			246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
																		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.		.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																														.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																														.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	N	G	R	Y	A	S	L	P	E	T	A	S	T	A	T	T	I	H	L	I	H	G	G	E	D	P	V	I	D	L	A	H	A	V	A	A	Q	E	A	L	I	S	A	G	G	D	V	T	L	D	I	V	E	D	L	G	H	A	I	D	.	N	R
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																														.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.																								.
Template Conservation																																																				.	.	.	.
Template Sequence		G	K	S	V	V	D	I	Y	S	L	S	G	Q	M	A	A	W	S	L	K	V	Q	G	F	L	S	S	R	K	T	K	V	P	I	L	A	M	S	L	E	G	D	P	V	S	P	Y	S	D	N	.	.	.	.	Q	M	V	A	F	F	S	T	Y	G	K	A	K	K	I	S	S	K	T	I	T	Q	G	Y	E	Q
Template Known Secondary structure		T		S											G	G	G	G		T	T	T	T	T	T	T	T	S	S		B	S	S								T	T		S	S	S						.	.	.	.						T	B	T	T								S	S		S	T	T	S
Template Predicted Secondary structure																																																				.	.	.	.
Template SS confidence
		325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.					.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400
		197	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	M	Q	F	A	L	D	H	L	R	Y	T	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	L	D	L	A	I	K	W	L	E	D	E	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		401	.	.	.	.	.	.	.	.	410	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions