Job Description P76561 Confidence 99.87% Date Thu Jan 5 12:24:39 GMT 2012 Rank 35 Aligned Residues 193 % Identity 17% Template c3iumA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:prolyl endopeptidase; PDBTitle: appep_wtx opened state Resolution 2.25 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		6	.	.	.	10	.	.	.	.	.	.			.	.	.	20	.	.	.	.	.			.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure													.	.										.	.
Query SS confidence													.	.										.	.
Query Sequence		F	V	V	Q	S	P	D	K	P	A	Q	.	.	Q	L	L	L	L	F	H	G	V	.	.	G	D	N	P	V	A	M	G	E	I	G	N	W	F	A	P	L	F	P	D	A	L	V	V	S	V	G	G	A	E	P	S	G	N	P	A	G	R	Q	W	F	S	V	Q	G	I	T	E	D	N	R	Q	A	R	V	D
Query Conservation													.	.										.	.
Alig confidence													.	.										.	.																																								.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	S	Y	R	K	G	L	K	L	D	G	S	N	P	T	I	L	Y	G	Y	G	G	F	D	V	S	L	T	P	S	F	S	V	S	V	A	N	W	L	D	L	G	G	V	Y	A	V	A	N	L	R	G	G	G	E	Y	G	Q	A	W	H	L	A	.	.	.	.	.	.	.	.	.	.	G	T	Q	Q	N	K	Q
Template Known Secondary structure						T	T				S	S											B	T	T	B																T	T									T	T	S	S	S	S							T	.	.	.	.	.	.	.	.	.	.	T	S	G	G	G
Template Predicted Secondary structure																																																																	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		439	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.											.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	I	M	P	T	F	I	E	T	V	R	Y	W	Q	K	Q	S	G	V	G	A	N	A	T	A	L	I	G	F	S	Q	G	A	I	M	V	L	E	S	I	K	A	E	P	G	L	A	S	R	V	I	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	V	F	D	D	F	I	A	A	A	E	Y	L	K	A	E	G	Y	T	R	T	D	R	L	A	I	R	G	G	S	N	G	G	L	L	V	G	A	V	X	T	Q	R	P	D	L	X	R	V	A	L	P	A	V	G	V	L	D	X	L	R	Y	H	T	F	T	A	G	T	G	W	A	Y	D	Y	G	T	S	A	D
Template Known Secondary structure																	T	T	S			G	G	G							T														T	T	T		S						S					G	G	G	S	T	T	S	G	G	G	G	G								S	S	S
Template Predicted Secondary structure
Template SS confidence
		509	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.
								134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.			150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.				180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure		.	.	.	.	.	.																	.	.																															.	.	.
Query SS confidence		.	.	.	.	.	.																	.	.																															.	.	.
Query Sequence		.	.	.	.	.	.	F	N	G	R	Y	A	S	L	P	E	T	A	S	T	A	T	.	.	T	I	H	L	I	H	G	G	E	D	P	V	I	D	L	A	H	A	V	A	A	Q	E	A	L	I	S	A	G	G	.	.	.	D	V	T	L	D	I	V	E	D	L	G	H	A	I	D	N	R	S	M	Q	F	A	L
Query Conservation		.	.	.	.	.	.																	.	.																															.	.	.
Alig confidence		.	.	.	.	.	.																	.	.																															.	.	.															.	.
Template Conservation																																																																									.	.
Template Sequence		S	E	A	X	F	D	Y	L	K	G	Y	S	P	L	H	N	V	R	P	G	V	S	Y	P	S	T	X	V	T	T	A	D	H	D	D	R	V	V	P	A	H	S	F	K	F	A	A	T	L	Q	A	D	N	A	G	P	H	P	Q	L	I	R	I	E	T	P	V	A	K	L	I	.	.	E	Q	S	A	D	I	Y
Template Known Secondary structure														T	T	T	T			T	T												S	S		S	S	S		T												T	T			S	S	S															.	.
Template Predicted Secondary structure																																																																									.	.
Template SS confidence
		589	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.			660	.	.	.	.	.	.
		203	.	.	.	.	.	.	210
Predicted Secondary structure
Query SS confidence
Query Sequence		D	H	L	R	Y	T	I	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	F	T	L	Y	E	X	G
Template Known Secondary structure								T	T
Template Predicted Secondary structure
Template SS confidence
		675	.	.	.	.	680	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions