Return to main results Retrieve Phyre Job Id

Job DescriptionP76561
Confidence99.94%DateThu Jan 5 12:24:39 GMT 2012
Rank11Aligned Residues189
% Identity19%Templatec3azqA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:aminopeptidase; PDBTitle: crystal structure of puromycin hydrolase s511a mutant complexed with2 pgg
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   11........20.... .....30.........40.........50.........60.........70.........80........
Predicted Secondary structure 








..




































Query SS confidence 













. .































































Query Sequence  PDKPAQQLLLLFHG. . VGDNPVAMGEIGNWFAPLFPDALVVSVGGAEPSGNPAGRQWFSVQGITEDNRQARVDAIMPTFI
Query Conservation 
       

 


.. 
            

                                                
Alig confidence 













..







































..........













Template Conservation        
 
   



                  
  
     

  
 
      ..........           
  
Template Sequence  PADELPPYVVMAHGGPTSRVPAVLDLDVAYFTSRGIGVADVNYGGSTGYGRAYRER. . . . . . . . . . LRGRWGVVDVEDCA
Template Known Secondary structure 
TT




SSSS




S

TTT

TT
SSS
T..........TTT
TTT
Template Predicted Secondary structure 































..........




Template SS confidence 















































































   419420.........430.........440.........450.........460.........470.... .....480........
 
   8990.........100.........110.........120.........130......
Predicted Secondary structure 













................................
Query SS confidence 















































. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Sequence  ETVRYWQKQSGVGANATALIGFSQGAIMVLESIKAEPGLASRVIAFNG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation    
        
    
 
 
 
 

                      ................................
Alig confidence 


































.











................................
Template Conservation              
  
  
 
 
 

         .   
 
 
      
                             
Template Sequence  AVATALAEEGTADRARLAVRGGAAGGWTAASSLVS. TDVYACGTVLYPVLDLLGWADGGTHDFESRYLDFLIGSFEEFPE
Template Known Secondary structure  TSS
TTSTS.



SS



TT
S
GGGTTTT

TTT
TT
Template Predicted Secondary structure 






.



















Template SS confidence 















































































   489490.........500.........510.........520... ......530.........540.........550.........560.......
 
   137..140.........150.........160.........170.........180.........190..... ....200........
Predicted Secondary structure  ...































.....
Query SS confidence  . . .


























































. . . . .












Query Sequence  . . . RYASLPETASTATTIHLIHGGEDPVIDLAHAVAAQEALISAGGDVTLDIVEDLGHAIDN. . . . . RSMQFALDHLRYT
Query Conservation  ...             


  

  
  

          
   
         
 

    .....         
   
Alig confidence  ...


























































.....












Template Conservation       

         
 
   
  
  
           
   
        
   
                      
Template Sequence  RYRDRAPLTRADRVRVPFLLLQGLEDPVCPPEQCDRFLEAVAGCGVPHAYLSFEGEGHGFRRKETMVRALEAELSLYAQV
Template Known Secondary structure  S
TGGGGGG

S
TT
SSS
TTTS


TT

SS

S
Template Predicted Secondary structure 



























Template SS confidence 















































































   568.570.........580.........590.........600.........610.........620.........630.........640.......
 
   209210
Predicted Secondary structure 

Query SS confidence 

Query Sequence  IP
Query Conservation 
 
Alig confidence 

Template Conservation 
 
Template Sequence  FG
Template Known Secondary structure  TT
Template Predicted Secondary structure 

Template SS confidence 

   648.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions