Job Description P76561 Confidence 99.93% Date Thu Jan 5 12:24:39 GMT 2012 Rank 17 Aligned Residues 195 % Identity 17% Template c2qtbB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:dipeptidyl peptidase 4; PDBTitle: human dipeptidyl peptidase iv/cd26 in complex with a 4-aryl2 cyclohexylalanine inhibitor Resolution 2.25 Å

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		6	.	.	.	10	.			.	.	.	.	.	.	.	.	20	.	.	.	.						.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure								.	.														.	.	.	.	.
Query SS confidence								.	.														.	.	.	.	.
Query Sequence		F	V	V	Q	S	P	.	.	D	K	P	A	Q	Q	L	L	L	L	F	H	G	.	.	.	.	.	V	G	D	N	P	V	A	M	G	E	I	G	N	W	F	A	P	L	F	P	D	A	L	V	V	S	V	G	G	A	E	P	S	G	N	P	A	G	R	Q	W	F	S	V	Q	G	I	T	E	D	N	R	Q	A
Query Conservation								.	.														.	.	.	.	.
Alig confidence								.	.														.	.	.	.	.																																									.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																				.	.	.	.	.	.	.	.	.	.
Template Sequence		M	I	L	P	P	H	F	D	K	S	K	K	Y	P	L	L	L	D	V	Y	A	G	P	C	S	Q	K	A	D	T	V	F	R	L	N	W	A	T	Y	L	A	S	T	E	N	I	I	V	A	S	F	D	G	R	G	S	G	Y	Q	G	D	K	I	M	H	A	.	.	.	.	.	.	.	.	.	.	I	N	R	R
Template Known Secondary structure						T	T			T	T	S												T	T											S								T	T										T	T		S	S	S						G	G	.	.	.	.	.	.	.	.	.	.	G	T	T
Template Predicted Secondary structure																																																																				.	.	.	.	.	.	.	.	.	.
Template SS confidence
		528	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.											.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	V	D	A	I	M	P	T	F	I	E	T	V	R	Y	W	Q	K	Q	S	G	V	G	A	N	A	T	A	L	I	G	F	S	Q	G	A	I	M	V	L	E	S	I	K	A	E	P	G	L	A	S	R	V	I	A	F	N	G	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	G	T	F	E	V	E	D	Q	I	E	A	A	R	Q	F	S	K	M	G	F	V	D	N	K	R	I	A	I	W	G	W	S	Y	G	G	Y	V	T	S	M	V	L	G	S	G	S	G	V	F	K	C	G	I	A	V	A	P	V	S	R	W	E	Y	Y	D	S	V	Y	T	E	R	Y	M	G	L	P	T	P	E
Template Known Secondary structure		T	T	S															T	T	S	S												T											T	T	T		S			S						S					G	G	G	S	B											S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		598	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.
										138	.	140	.	.	.	.	.	.	.	.		.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.						.	.	.	.	200	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.												.																																																.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.												.																																																.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	Y	A	S	L	P	E	T	A	S	T	A	.	T	T	I	H	L	I	H	G	G	E	D	P	V	I	D	L	A	H	A	V	A	A	Q	E	A	L	I	S	A	G	G	D	V	T	L	D	I	V	E	D	L	G	H	A	I	D	N	.	.	.	.	.	R	S	M	Q	F	A	L	D
Query Conservation		.	.	.	.	.	.	.	.												.																																																.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.												.																																																.	.	.	.	.
Template Conservation
Template Sequence		D	N	L	D	H	Y	R	N	S	T	V	M	S	R	A	E	N	F	K	Q	V	E	Y	L	L	I	H	G	T	A	D	D	N	V	H	F	Q	Q	S	A	Q	I	S	K	A	L	V	D	V	G	V	D	F	Q	A	M	W	Y	T	D	E	D	H	G	I	A	S	S	T	A	H	Q	H	I	Y	T	H	M	S	H
Template Known Secondary structure		T	T							S		S	G	G	G	G	G	G	G	G	G	S								T	T		S	S	S		T													T	T									T	T			T	T			S
Template Predicted Secondary structure
Template SS confidence
		678	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.
		204	.	.	.	.	.	210
Predicted Secondary structure
Query SS confidence
Query Sequence		H	L	R	Y	T	I	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	I	K	Q	C	F	S
Template Known Secondary structure							T	T
Template Predicted Secondary structure
Template SS confidence
		758	.	760	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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