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Job DescriptionP76561
Confidence99.94%DateThu Jan 5 12:24:39 GMT 2012
Rank12Aligned Residues194
% Identity19%Templatec2hu7A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:acylamino-acid-releasing enzyme; PDBTitle: binding of inhibitors by acylaminoacyl peptidase
Resolution2.01 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.... .....30.........40.........50.........60.........70.........80...
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Query Sequence  FVVQSPDKPAQQLLLLFHG. . VGDNPVAMGEIGNWFAPLFPDALVVSVGGAEPSGNPAGRQWFSVQGITEDNRQARVDAI
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Template Sequence  VLESGRAPTPGPTVVLVHGGPFAEDSDSWDTFAASLAAAGFHVVMPNYRGSTGYGEEWR. . . . . . . . . . LKIIGDPCGGE
Template Known Secondary structure  TTS
SS
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SS

T


TT
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TTT
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   350.........360.........370.........380.........390.........400........ .410.........
 
   84.....90.........100.........110.........120.........130.......
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Query Sequence  MPTFIETVRYWQKQSGVGANATALIGFSQGAIMVLESIKAEPGLASRVIAFNGR. . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  LEDVSAAARWARESGLAS. . ELYIMGYSYGGYMTLCALTMKPGLFKAGVAGASVVDWEEMYELSDAAFRNFIEQLTGGSR
Template Known Secondary structure  TT
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   420.........430....... ..440.........450.........460.........470.........480.........490.......
 
   138.140.........150.........160.........170.........180.........190.... .....200.......
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Query Sequence  . . . . . YASLPETASTATTIHLIHGGEDPVIDLAHAVAAQEALISAGGDVTLDIVEDLGHAID. . . . . NRSMQFALDHLRY
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Template Sequence  EIMRSRSPINHVDRIKEPLALIHPQNDSRTPLKPLLRLMGELLARGKTFEAHIIPDAGHAINTMEDAVKILLPAVFFLAT
Template Known Secondary structure  T
GGG
GGG

S
TT
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B
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   498.500.........510.........520.........530.........540.........550.........560.........570.......
 
   208.210.
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Query Sequence  TIPK
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Template Conservation      
Template Sequence  QRER
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   578.580.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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