Return to main results Retrieve Phyre Job Id

Job DescriptionP76561
Confidence99.32%DateThu Jan 5 12:24:39 GMT 2012
Rank199Aligned Residues201
% Identity13%Templatec1mpxB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:alpha-amino acid ester hydrolase; PDBTitle: alpha-amino acid ester hydrolase labeled with selenomethionine
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20........ .30.........40.........50.........60.........70.
Predicted Secondary structure 

















...........
























Query SS confidence 

























. . . . . . . . . . .










































Query Sequence  HDHFVVQSPDKPAQQLLLLFHGVGDN. . . . . . . . . . . PVAMGEIGNWFAPLFPDALVVSVGGAEPSGNPAGRQWFSVQGI
Query Conservation       
  
       

 


 
  ...........          

                               
Alig confidence 












.











...........
































.....




Template Conservation   
 
  
      .
 

   


                        
  




  
 

 
 
 
  .....     
Template Sequence  HTVIVLPKGAKNA. PIVLTRTPYDASGRTERLASPHXKDLLSAGDDVFVEGGYIRVFQDVRGKYGSEGDY. . . . . VXTRP
Template Known Secondary structure  TT

S.SS
T
SS

S
S
GGGTT

TTSTT

S

.....
TT

Template Predicted Secondary structure 





.




































.....



Template SS confidence 















































































   61........70... ......80.........90.........100.........110.........120......... 130....
 
   72.......80.........90.........100.........110.........120.........130.........140...
Predicted Secondary structure 




























........
Query SS confidence 







































































. . . . . . . .
Query Sequence  TEDNRQARVDAIMPTFIETVRYWQKQSGVGANATALIGFSQGAIMVLESIKAEPGLASRVIAFNGRYASLPE. . . . . . . .
Query Conservation                     
        
    
 
 
 
 

                             ........
Alig confidence 







































































........
Template Conservation             
  
  
 
 
   
  

 




 
 



      
    
 





     
 
       

 
Template Sequence  LRGPLNPSEVDHATDAWDTIDWLVKNVSESNGKVGXIGSSYEGFTVVXALTNPHPALKVAVPESPXIDGWXGDDWFNYGA
Template Known Secondary structure 
SBTTB
SS


TTTTS

TTS



TTTTSSSTT
Template Predicted Secondary structure 










































Template SS confidence 















































































   135....140.........150.........160.........170.........180.........190.........200.........210....
 
   144..
Predicted Secondary structure  .............................................................................


Query SS confidence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .


Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . TAS
Query Conservation  .............................................................................   
Alig confidence  .............................................................................


Template Conservation                                                                 
  
             
Template Sequence  FRQVNFDYFTGQLSKRGKGAGIARQGHDDYSNFLQAGSAGDFAKAAGLEQLPWWHKLTEHAAYDAFWQEQALDKVXARTP
Template Known Secondary structure  BGGGSSSS






SSS

STTGGGST
SS
TT
TS
Template Predicted Secondary structure 













































Template SS confidence 















































































   215....220.........230.........240.........250.........260.........270.........280.........290....
 
   147..150.........160..... ....170.........180.........190... ......200......
Predicted Secondary structure 









..










..................
Query SS confidence 


















. .



























. . . . . . . . . . . . . . . . . .












Query Sequence  TATTIHLIHGGEDPVIDLA. . HAVAAQEALISAGGDVTLDIVEDLGHAI. . . . . . . . . . . . . . . . . . DNRSMQFALDHLR
Query Conservation     


  

  
  

  ..        
   
         
 

  ..................           
 
Alig confidence 


















..






















.



..................












Template Conservation 
 

 
 
 

 
                         

 


. 
                              


Template Sequence  LKVPTXWLQGLWDQEDXWGAIHSYAAXEPRDKRNTLNYLVXGPW. RHSQVNYDGSALGALNFEGDTARQFRHDVLRPFFD
Template Known Secondary structure 

S
TT
SS
SSGGG
TTSSSS
.STTGGGS

STT
SS
T
Template Predicted Secondary structure 


























.























Template SS confidence 















































































   295....300.........310.........320.........330........ .340.........350.........360.........370...
 
   207..210
Predicted Secondary structure 

Query SS confidence 



Query Sequence  YTIP
Query Conservation    
 
Alig confidence 



Template Conservation    

Template Sequence  QYLV
Template Known Secondary structure  S
Template Predicted Secondary structure 
Template SS confidence 



   374...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions