Job Description P0A6I9 Confidence 99.37% Date Thu Jan 5 11:03:14 GMT 2012 Rank 79 Aligned Residues 157 % Identity 19% Template c3trfB_ PDB info PDB header:transferase Chain: B: PDB Molecule:shikimate kinase; PDBTitle: structure of a shikimate kinase (arok) from coxiella burnetii Resolution 2.60 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.		.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure																						.
Query SS confidence																						.
Query Sequence		V	A	L	T	G	G	I	G	S	G	K	S	T	V	A	N	A	F	A	D	.	L	G	I	N	V	I	D	A	D	I	I	A	R	Q	V	V	E	P	G	A	P	A	L	H	A	I	A	D	H	F	G	A	N	M	I	A	A	D	G	T	L	Q	R	R	A	L	R	E	R	I	F	A	N	P	E	E	K	N	W
Query Conservation																						.
Alig confidence																						.																	.	.	.																		.	.	.
Template Conservation																																							.	.	.																		.	.	.
Template Sequence		I	Y	L	I	G	L	M	G	A	G	K	T	S	V	G	S	Q	L	A	K	L	T	K	R	I	L	Y	D	S	D	K	E	I	E	K	R	T	.	.	.	G	A	D	I	A	W	I	F	E	M	E	G	E	A	G	F	R	.	.	.	R	R	E	R	E	M	I	E	A	L	C	K	L	D	N	I	I	L	A	T
Template Known Secondary structure							S	T	T	S	S											T	T																.	.	.	T	S																.	.	.													S	S	S
Template Predicted Secondary structure																																							.	.	.																		.	.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.				.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.				.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.						.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																														.	.	.	.	.
Query SS confidence																																																														.	.	.	.	.
Query Sequence		L	N	A	L	L	H	P	L	I	Q	Q	E	T	Q	H	Q	I	Q	Q	A	T	S	P	Y	V	L	W	V	V	P	L	L	V	E	N	S	L	Y	K	K	A	N	R	V	L	V	V	D	V	S	P	E	T	Q	L	K	R	T	M	Q	.	.	.	.	.	R	D	D	V	T	R	E	H	V	E	Q	I	L	A	A
Query Conservation																																																														.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.
Template Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	G	G	V	V	L	D	E	K	N	R	Q	Q	I	S	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	G	V	V	I	Y	L	T	A	S	I	D	T	Q	L	K	R	I	G	Q	K	G	E	M	R	R	P	L	F	I	K	N	N	S	K	E	K	L	Q	Q
Template Known Secondary structure			G	G	G	G	G	S										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						T	T		S	S
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.																									.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
		159	160	.	.	.	.	.	.			.	.	.	170	.	.	.	.	.	.	.		.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure										.	.												.
Query SS confidence										.	.												.
Query Sequence		Q	A	T	R	E	A	R	L	.	.	A	V	A	D	D	V	I	D	N	N	G	.	A	P	D	A	I	A	S	D	V	A	R	L	H	A
Query Conservation										.	.												.
Alig confidence										.	.												.
Template Conservation
Template Sequence		L	N	E	I	R	K	P	L	Y	Q	A	M	A	D	L	V	Y	P	T	D	D	L	N	P	R	Q	L	A	T	Q	I	L	V	D	I	K
Template Known Secondary structure															S						T	T
Template Predicted Secondary structure
Template SS confidence
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions