Return to main results Retrieve Phyre Job Id

Job DescriptionP0A6I9
Confidence96.82%DateThu Jan 5 11:03:14 GMT 2012
Rank326Aligned Residues28
% Identity43%Templatec3dm5A_
PDB info PDB header:rna binding protein, transport proteinChain: A: PDB Molecule:signal recognition 54 kda protein; PDBTitle: structures of srp54 and srp19, the two proteins assembling2 the ribonucleic core of the signal recognition particle3 from the archaeon pyrococcus furiosus.
Resolution2.51 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10....... ..20.........30
Predicted Secondary structure 





....


Query SS confidence 














. . . .












Query Sequence  YIVALTGGIGSGKST. . . . VANAFADLGINVI
Query Conservation   

 
 
  





....

  
   
   
Alig confidence 














....












Template Conservation   

  

  
 




 



      
 

 
Template Sequence  TILLMVGIQGSGKTTTVAKLARYFQKRGYKVG
Template Known Secondary structure 

TTSSTTT

Template Predicted Secondary structure 









Template SS confidence 































   101........110.........120.........130..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions