Job Description P0A6I9 Confidence 99.44% Date Thu Jan 5 11:03:14 GMT 2012 Rank 67 Aligned Residues 182 % Identity 17% Template c2z0hA_ PDB info PDB header:transferase Chain: A: PDB Molecule:thymidylate kinase; PDBTitle: crystal structure of thymidylate kinase in complex with dtdp2 and adp from thermotoga maritima Resolution 2.10 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.		.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																								.
Query SS confidence																								.
Query Sequence		Y	I	V	A	L	T	G	G	I	G	S	G	K	S	T	V	A	N	A	F	A	D	.	L	G	I	N	V	I	D	A	D	I	I	A	R	Q	V	V	E	P	G	A	P	A	L	H	A	I	A	D	H	F	G	A	N	M	I	A	A	D	G	T	L	Q	R	R	A	L	R	E	R	I	F	A	N	P	E	E	K
Query Conservation																								.
Alig confidence																								.												.	.	.	.
Template Conservation																																				.	.	.	.
Template Sequence		M	F	I	T	F	E	G	I	D	G	S	G	K	S	T	Q	I	Q	L	L	A	Q	Y	L	E	K	R	G	K	V	I	L	K	R	.	.	.	.	E	P	G	G	T	E	T	G	E	K	I	R	K	I	L	L	E	E	E	V	T	P	K	A	E	L	F	L	F	L	A	S	R	N	L	L	V	T	E	I	K	Q
Template Known Secondary structure									S	T	T	S	S																							.	.	.	.	S	S		S	S													S																							T	T
Template Predicted Secondary structure																																				.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.					.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	W	L	N	A	L	L	H	P	L	I	Q	Q	E	T	Q	H	Q	I	Q	Q	A	T	S	P	Y	V	L	W	V	V	P	L	L	V	E	N	S	L	Y	K	K	A	N	R	V	L	V	V	D	V	S	P	E	T	Q	L	K	R	T	M	Q	R	D	D	V	T	R	E	H	V	E	Q	I	L	A	A	Q	A	T
Query Conservation
Alig confidence																																									.	.																							.	.
Template Conservation																																									.	.																							.	.
Template Sequence		Y	Y	A	V	L	L	D	R	Y	T	D	S	S	V	A	Y	Q	G	F	G	R	N	L	G	K	E	I	V	E	E	L	N	D	F	A	T	D	G	L	.	.	I	P	D	L	T	F	Y	I	D	V	D	V	E	T	A	L	K	R	K	N	R	F	.	.	E	K	R	E	F	L	E	R	V	R	E	G	Y	L	V
Template Known Secondary structure									S									T	T	T	T	T		S														T	T		.	.			S																				.	.
Template Predicted Secondary structure																																									.	.																							.	.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.			.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.			.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	E	A	R	L	A	V	A	D	D	V	I	D	N	N	G	A	P	D	A	I	A	S	D	V	A	R	L	H	A	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	A	R	E	H	P	E	R	I	V	V	L	D	G	K	R	S	I	E	E	I	H	R	D	V	V	R	E	V	K	R
Template Known Secondary structure							T	T	T						T	T	S													T	T
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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