Job Description P0A6I9 Confidence 96.74% Date Thu Jan 5 11:03:14 GMT 2012 Rank 340 Aligned Residues 169 % Identity 11% Template c2xkxB_ PDB info PDB header:structural protein Chain: B: PDB Molecule:disks large homolog 4; PDBTitle: single particle analysis of psd-95 in negative stain Resolution 22.9 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.						.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.
Query SS confidence																						.	.	.	.	.
Query Sequence		V	A	L	T	G	G	I	G	S	G	K	S	T	V	A	N	A	F	A	D	.	.	.	.	.	L	G	I	N	V	I	D	A	D	I	I	A	R	Q	V	V	E	P	G	A	P	A	L	H	A	I	A	D	H	F	G	A	N	M	I	A	A	D	G	T	L	Q	R	R	A	L	R	E	R	I	F	A	N	P	E
Query Conservation																						.	.	.	.	.
Alig confidence								.	.	.												.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.																								.	.
Template Conservation								.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.																								.	.
Template Sequence		I	I	I	L	G	P	.	.	.	T	K	D	R	A	N	D	D	L	L	S	E	F	P	D	K	F	G	S	C	V	P	H	T	T	R	P	K	R	E	.	.	.	.	.	.	.	.	.	.	.	.	Y	E	I	D	G	R	D	Y	H	F	V	S	S	R	E	K	M	E	K	D	I	R	A	.	.	H	K	F	I
Template Known Secondary structure						S	T	.	.	.	T													S	T	T										S				T	.	.	.	.	.	.	.	.	.	.	.	.	T			T	T	T	T					S												.	.	T
Template Predicted Secondary structure								.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.																								.	.
Template SS confidence
		534	.	.	.	.	.				540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.													570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.			.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	K	N	W	L	N	A	L	L	H	P	L	I	Q	Q	E	T	Q	H	Q	I	Q	Q	A	T	S	P	Y	V	L	W	V	V	P	L	L	V	E	N	S	L	Y	K	K	A	N	R	V	L	V	V	D	V	S	P	E	T	Q	L	K	R	T	M	Q	R	D	D	V	T	R	E	H	V	E	Q	I	L	A	A	Q
Query Conservation
Alig confidence																																																																.	.
Template Conservation																																																																.	.
Template Sequence		E	A	G	Q	Y	N	S	H	L	Y	G	T	S	V	Q	S	V	R	E	V	A	E	Q	G	K	H	C	I	L	D	V	S	A	N	A	V	R	R	L	Q	A	A	H	L	H	P	I	A	I	F	I	R	P	R	S	L	E	N	V	L	E	I	.	.	N	K	R	I	T	E	E	Q	A	R	K	A	F	D	R	A
Template Known Secondary structure							T	T																T	T									T	T									T											S	S								.	.		T	T	S
Template Predicted Secondary structure																																																																.	.
Template SS confidence
		597	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.			.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.
		160	.	.	.		.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure						.
Query SS confidence						.
Query Sequence		A	T	R	E	.	A	R	L	A	V	A	D	D	V	I	D	N	N	G	A	P	D	A	I	A	S	D	V	A	R	L	H	A	H	Y
Query Conservation						.
Alig confidence						.														.
Template Conservation																				.
Template Sequence		T	K	L	E	Q	E	F	T	E	C	F	S	A	I	V	E	G	D	.	S	F	E	E	I	Y	H	K	V	K	R	V	I	E	D	L
Template Known Secondary structure								S	S	T	T		S						S	.	S
Template Predicted Secondary structure																				.
Template SS confidence
		675	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.		.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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