Return to main results Retrieve Phyre Job Id

Job DescriptionP0A6I9
Confidence96.30%DateThu Jan 5 11:03:14 GMT 2012
Rank414Aligned Residues33
% Identity39%Templatec2v3cC_
PDB info PDB header:signaling proteinChain: C: PDB Molecule:signal recognition 54 kda protein; PDBTitle: crystal structure of the srp54-srp19-7s.s srp rna complex2 of m. jannaschii
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20... ......30.....
Predicted Secondary structure 





......





Query SS confidence 




















. . . . . .











Query Sequence  YIVALTGGIGSGKSTVANAFA. . . . . . DLGINVIDADII
Query Conservation   

 
 
  







  
 ......  
   
  
  
Alig confidence 




















......











Template Conservation   

 


  
 




 



      
 

 

 


 
Template Sequence  NVILLVGIQGSGKTTTAAKLARYIQKRGLKPALIAADTY
Template Known Secondary structure 



SSSSTT



S

Template Predicted Secondary structure 












Template SS confidence 






































   101........110.........120.........130.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions