Job Description P0A6I9 Confidence 99.54% Date Thu Jan 5 11:03:14 GMT 2012 Rank 52 Aligned Residues 147 % Identity 21% Template c2pt5D_ PDB info PDB header:transferase Chain: D: PDB Molecule:shikimate kinase; PDBTitle: crystal structure of shikimate kinase (aq_2177) from aquifex aeolicus2 vf5 Resolution 2.10 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.		.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure																						.
Query SS confidence																						.
Query Sequence		V	A	L	T	G	G	I	G	S	G	K	S	T	V	A	N	A	F	A	D	.	L	G	I	N	V	I	D	A	D	I	I	A	R	Q	V	V	E	P	G	A	P	A	L	H	A	I	A	D	H	F	G	A	N	M	I	A	A	D	G	T	L	Q	R	R	A	L	R	E	R	I	F	A	N	P	E	E	K	N	W
Query Conservation																						.
Alig confidence																						.																	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																							.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	Y	L	I	G	F	X	C	S	G	K	S	T	V	G	S	L	L	S	R	S	L	N	I	P	F	Y	D	V	D	E	E	V	Q	K	R	E	.	.	.	G	L	S	I	P	Q	I	F	E	K	K	G	E	A	Y	F	R	K	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure								G	G	G														T															.	.	.	T																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																							.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.				40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.				.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																																									.	.	.
Query SS confidence																																									.	.	.
Query Sequence		L	N	A	L	L	H	P	L	I	Q	Q	E	T	Q	H	Q	I	Q	Q	A	T	S	P	Y	V	L	W	V	V	P	L	L	V	E	N	S	L	Y	K	.	.	.	K	A	N	R	V	L	V	V	D	V	S	P	E	T	Q	L	K	R	T	M	Q	R	D	D	V	T	R	E	H	V	E	Q	I	L	A	A	Q	A
Query Conservation																																									.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.																															.	.	.																							.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.																																																								.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	E	F	E	V	L	K	D	L	S	E	K	E	N	V	V	I	S	T	G	G	G	L	G	A	N	E	E	A	L	N	F	X	K	S	R	G	T	T	V	F	I	D	I	P	F	E	V	F	L	E	R	C	R	P	L	.	.	.	.	.	D	E	I	K	N	L	F	E	E	R	R
Template Known Secondary structure		.	.	.	.	.	.	.	.	.									T	T	S	S	S											T												S																				.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.																																																								.	.	.	.	.
Template SS confidence
											59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.						.	.	.	.	.	.	120	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	R	E	A	R	L	A	V	A	D	D	V	I	D	N	N	G	A	P	D	A	I	A	S	D	V	A	R	L	H	A	H
Query Conservation
Alig confidence							.	.	.
Template Conservation							.	.	.
Template Sequence		K	I	Y	S	K	.	.	.	A	D	I	K	V	K	G	E	K	P	P	E	E	V	V	K	E	I	L	L	S	L	E	G
Template Known Secondary structure					T	T	.	.	.	S	S						S	S
Template Predicted Secondary structure							.	.	.
Template SS confidence
		135	.	.	.	.				140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions