Job Description P0A6I9 Confidence 99.67% Date Thu Jan 5 11:03:14 GMT 2012 Rank 24 Aligned Residues 153 % Identity 23% Template c1zuiA_ PDB info PDB header:transferase Chain: A: PDB Molecule:shikimate kinase; PDBTitle: structural basis for shikimate-binding specificity of helicobacter2 pylori shikimate kinase Resolution 2.30 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.		.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure																						.
Query SS confidence																						.
Query Sequence		V	A	L	T	G	G	I	G	S	G	K	S	T	V	A	N	A	F	A	D	.	L	G	I	N	V	I	D	A	D	I	I	A	R	Q	V	V	E	P	G	A	P	A	L	H	A	I	A	D	H	F	G	A	N	M	I	A	A	D	G	T	L	Q	R	R	A	L	R	E	R	I	F	A	N	P	E	E	K	N	W
Query Conservation																						.
Alig confidence																						.																	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																							.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	V	L	I	G	F	M	G	S	G	K	S	S	L	A	Q	E	L	G	L	A	L	K	L	E	V	L	D	T	D	M	I	I	S	E	R	V	.	.	.	G	L	S	V	R	E	I	F	E	E	L	G	E	D	N	F	R	M	F	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure						S		T	T	S														T															.	.	.	T	S																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																							.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40				.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	A	L	L	H	P	L	I	Q	Q	E	T	Q	H	Q	I	Q	Q	A	T	S	P	Y	V	L	W	V	V	P	L	L	V	E	N	S	L	Y	K	K	A	N	R	V	L	V	V	D	V	S	P	E	T	Q	L	K	R	T	M	Q	R	D	D	V	T	R	E	H	V	E	Q	I	L	A	A	Q	A	T	R	E
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	K	N	L	I	D	E	L	K	T	L	K	T	P	H	V	I	S	T	G	G	G	I	V	M	H	E	N	L	K	G	L	G	T	T	F	Y	L	K	M	D	F	E	T	L	I	K	R	L	N	Q	R	E	K	R	P	L	L	N	N	L	T	Q	A	K	E	L	F	E	K	R
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.								T	T		S	S								T	T	G	G	G		G	G	G	T	T	S																								G	G	G	G	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.
Template SS confidence
												61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
		164	.	.			.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure					.	.
Query SS confidence					.	.
Query Sequence		A	R	L	.	.	A	V	A	D	D	V	I	D	N	N	G	A	P	D	A	I	A	S	D	V	A	R	L	H
Query Conservation					.	.
Alig confidence					.	.
Template Conservation
Template Sequence		Q	A	L	Y	E	K	N	A	S	F	I	I	D	A	R	G	G	L	N	N	S	L	K	Q	V	L	Q	F	I
Template Known Secondary structure										S						S	S												T
Template Predicted Secondary structure
Template SS confidence
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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