Job Description P0A6I9 Confidence 97.08% Date Thu Jan 5 11:03:14 GMT 2012 Rank 274 Aligned Residues 146 % Identity 13% Template c1qhiA_ PDB info PDB header:transferase Chain: A: PDB Molecule:protein (thymidine kinase); PDBTitle: herpes simplex virus type-i thymidine kinase complexed with2 a novel non-substrate inhibitor, 9-(4-hydroxybutyl)-n2-3 phenylguanine Resolution 1.90 Å

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		1	.			.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.								.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.									.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.
Predicted Secondary structure				.	.																											.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.
Query SS confidence				.	.																											.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.
Query Sequence		M	R	.	.	Y	I	V	A	L	T	G	G	I	G	S	G	K	S	T	V	A	N	A	F	A	D	L	G	I	N	.	.	.	.	.	.	.	V	I	D	A	D	I	I	A	R	Q	V	V	E	P	G	A	P	A	L	.	.	.	.	.	.	.	.	H	A	I	A	D	H	F	G	A	N	M	I	A	A	D	G
Query Conservation				.	.																											.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.
Alig confidence				.	.																											.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	P	T	L	L	R	V	Y	I	D	G	P	H	G	M	G	K	T	T	T	T	Q	L	L	D	I	V	Y	V	P	E	P	M	T	Y	W	R	V	L	G	A	S	E	T	I	A	N	I	Y	T	T	Q	H	R	L	D	Q	G	E	I	S	A	G	D	A	A	V	V	M	T	S	A	Q	I	T	M	G	M	P	Y
Template Known Secondary structure												S	S	T	T	S	S						T	T															T	T	S	S	S															T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.		.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure																																																													.
Query SS confidence																																																													.
Query Sequence		T	L	Q	R	R	A	L	R	E	R	I	F	A	N	P	E	E	K	N	W	L	N	A	L	L	H	P	L	I	Q	Q	E	T	Q	H	Q	I	Q	Q	A	T	S	P	Y	V	L	W	V	V	P	L	L	V	E	N	S	L	Y	K	.	K	A	N	R	V	L	V	V	D	V	S	P	E	T	Q	L	K	R	T	M
Query Conservation																																																													.
Alig confidence																																																													.
Template Conservation
Template Sequence		A	V	T	D	A	V	L	A	P	H	I	G	G	E	A	P	P	A	L	T	L	I	F	D	R	H	P	I	A	A	L	L	C	Y	P	A	A	R	Y	L	M	G	S	M	T	P	Q	A	V	L	A	F	V	A	L	I	P	P	T	L	P	G	T	N	I	V	L	G	A	L	P	E	D	R	H	I	D	R	L	A
Template Known Secondary structure									G	G	G								S														T								T	T	T	S	S											T						T	T
Template Predicted Secondary structure
Template SS confidence
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
		143	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	R	D	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	R	Q	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		219	220	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions