|   |
23 | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | |
|
. | . | . | . | . | . | 50 | . | . | |
|
|
|
|
|
|
|
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|
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|
|
|
|
. | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  | . | . |  |  |  |  |
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
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|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
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|
|
Query Sequence |   |
V | K | K | L | E | H | A | V | P | M | A | K | A | L | V | A | G | G | V | R | V | . |
. |
L | E | V | T | L | R | T | E | C | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
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. |
. |
. |
. |
A | V | D | A | I | R | A | I | A | K | E | V | P | E | A | I | V | G | A | G | T | V | L | N | P | Q | Q | L | A | E |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |
|
|
|   |   |   |
|
|
|   |   | . | . |
|
|
|   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |
|
|   |   |   |
|   |   |   |
|   |   |   |   |
Alig confidence |   |
|
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|
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|
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|
|
| . | . |
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| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
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|
|
|
| . | . |
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|
|
Template Conservation |   |
|
|
|   |   |   |   |
|   |   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |
|
|   |
|
|
|   |   |   |   |   |
|   |
|   |
|   |
|
|   |   |
|   |   |   |   |   |   |   |
|
|   |   |   |
| . | . |
|
|   |
|   |   |   |   |   |   |
Template Sequence |   |
I | E | S | E | E | L | L | L | K | V | G | E | E | I | K | R | L | S | E | K | F | K | E | V | E | F | V | F | K | S | S | F | D | K | A | N | R | S | S | I | H | S | F | R | G | H | G | L | E | Y | G | V | K | A | L | R | K | V | K | E | E | F | G | L | K | I | T | T | . |
. |
D | I | H | E | S | W | Q | A | E | P |
Template Known Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| T | T |  |  |  |  |  |  |
| B | S |
|
| T | T |
| S | S | T | T | S |
|
|
| S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  | . | . |  |
| S | S | G | G | G |  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
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|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  | . | . |  |
|
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
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  |   |
1013 | . | . | . | . | . | . | 1020 | . | . | . | . | . | . | . | . | . | 1030 | . | . | . | . | . | . | . | . | . | 1040 | . | . | . | . | . | . | . | . | . | 1050 | . | . | . | . | . | . | . | . | . | 1060 | . | . | . | . | . | . | . | . | . | 1070 | . | . | . | . | . | . | . | . | . | 1080 | |
|
. | . | . | . | . | . | . | . | . | 1090 |
  |
  |   |
83 | . | . | . | . | . | . | 90 | . | . | . | . | |
|
|
. | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | |
|
. | . | . | |
. | . | . | 120 | . | . | . | . | . | . | . | |
|
|
|
. | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | |
|
|
|
. | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|  |  |
|
|
| . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  | . | . |  |  |
| . |
|  |  |  |  |  |  |  |  |  |
| . | . | . | . |
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|  |  |  | . | . | . | . |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
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|
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|
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|
|
|
|
|
|
| . |
. |
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|
| . |
|
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|
|
|
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|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
Query Sequence |   |
V | T | E | A | G | A | Q | F | A | I | S | P | . |
. |
. |
G | L | T | E | P | L | L | K | A | A | T | E | G | T | I | P | L | I | P | . |
. |
G | I | S | . |
T | V | S | E | L | M | L | G | M | D | Y | . |
. |
. |
. |
G | L | K | E | F | K | F | F | P | A | E | A | N | G | G | V | K | A | . |
. |
. |
. |
L | Q | A |
Query Conservation |   |
|   |   |
|
|
|
|   |
|   |   |   | . | . | . |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |   | . | . |
|
|   | . |
|   |   |
|   |   |   |
|   |   |   | . | . | . | . |
|
|
|   |
|   |   |   |
|   |   |   |   |   |   |   |   |   | . | . | . | . |
|   |   |
Alig confidence |   |
|
|
|
| . |
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
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|
| . | . |
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| . |
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|
| . | . | . | . |
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|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
Template Conservation |   |
|   |   |   | . |
|
|   |   |
|
|
|
|   |   |   |   |
|   |   |
|
|   |   |   |
|   |   |
|
|
|
|   |
|
|   |
|   |   |   |   |   |   |
|   |   |   |
|
|
|   |
|   |   |   |
|
|   |   |
|   |
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |
|   |   |
Template Sequence |   |
V | A | E | V | . |
A | D | I | I | Q | I | P | A | F | L | C | R | Q | T | D | L | L | L | A | A | A | K | T | G | R | A | V | N | V | K | K | G | Q | F | L | A | P | W | D | T | K | N | V | V | E | K | L | K | F | G | G | A | K | E | I | Y | L | T | E | R | G | T | T | F | G | Y | N | N | L | V | V | D | F | R | S |
Template Known Secondary structure |   |
 |  | T | T | . |
| S |  |  |  |  |
| G | G | G | T | T |
|  |  |  |  |  |  |  |  | T | T | T | S |  |  |  |  |  |
|
| T | T |
|
| G | G | G | G |  |  |  |  |  |  |  |  |  | T | T |
| S | S |  |  |  |  |  |
|
|  |  |
| S | T | T |
|  |  |
|
| T | T |  |
Template Predicted Secondary structure |   |
 |  |  |  | . |  |  |  |  |  |
|
|  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
  |   |
1091 | . | . | . | |
. | . | . | . | . | 1100 | . | . | . | . | . | . | . | . | . | 1110 | . | . | . | . | . | . | . | . | . | 1120 | . | . | . | . | . | . | . | . | . | 1130 | . | . | . | . | . | . | . | . | . | 1140 | . | . | . | . | . | . | . | . | . | 1150 | . | . | . | . | . | . | . | . | . | 1160 | . | . | . | . | . | . | . | . | . |
  |
  |   |
149 | 150 | . | . | . | . | . | . | . | . | . | 160 | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | |
|
|
. | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
. | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
| . | . | . |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
| . | . | . | . | . | . | . |
|  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
| . |
. |
. |
|
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|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
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|
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|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | A | G | P | F | S | Q | V | R | F | C | P | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
T | G | G | I | S | . |
. |
. |
P | A | N | Y | R | D | Y | L | A | L | K | S | V | L | C | I | G | G | S | W | L | V | . |
. |
. |
. |
. |
. |
. |
P | A | D | A | L | E | A | G | D | Y | D | R | I | T | K | L |
Query Conservation |   |
|   |   |   |   |   |   |
|
|
|   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |
|
|
|   | . | . | . |   |   |
|   |   |   |   |
|   |
|
|
|   |   |
|   |
|
|
|   |
|   | . | . | . | . | . | . | . |   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
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| . | . | . |
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| . | . | . | . | . | . | . |
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|   |   |   |   |
|
|
|   |
|   |
|
|   |   |   |   |
|   |
|   |
|
|
|
|   |
|   |   |   |   |
|   |   |
|   |   |
|
|
|
|   |
|
|   |
|   |
|
|
|   |
|   |   |
|
|   |
|   |
|
|   |   |   |
|
|   |
|   |
|
|   |   |
|   |   |   |
Template Sequence |   |
L | P | I | M | K | Q | W | A | K | V | I | Y | D | A | T | H | S | V | Q | L | P | G | G | L | G | D | K | S | G | G | M | R | E | F | I | F | P | L | I | R | A | A | V | A | V | G | C | D | G | V | F | M | E | T | H | P | E | P | E | K | A | L | S | D | A | S | T | Q | L | P | L | S | Q | L | E | G | I | I | E | A |
Template Known Secondary structure |   |
 |  |  |  | T | T | T | S |  |  |  |  |  | T | T | G | G | G |  |  | T | T |
| S | S | S | S |
|  |  |
| G | G | G |  |  |  |  |  |  |  |  |  |  |  |
|
| S |  |  |  |  |  |  |  | S | S | G | G | G |
| S | S |
| T | T | T |
|  |  | G | G | G |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
  |   |
1170 | . | . | . | . | . | . | . | . | . | 1180 | . | . | . | . | . | . | . | . | . | 1190 | . | . | . | . | . | . | . | . | . | 1200 | . | . | . | . | . | . | . | . | . | 1210 | . | . | . | . | . | . | . | . | . | 1220 | . | . | . | . | . | . | . | . | . | 1230 | . | . | . | . | . | . | . | . | . | 1240 | . | . | . | . | . | . | . | . | . |
  |
  |   |
204 | . | . | . | . | . | 210 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | R | E | A | V | E | G | A | K |
Query Conservation |   |
  |
|   |   |
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |   |   |   |   |
Template Sequence |   |
I | L | E | I | R | E | V | A | S |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
  |   |
1250 | . | . | . | . | . | . | . | . |
  |