Job Description P0A955 Confidence 94.75% Date Thu Jan 5 11:09:25 GMT 2012 Rank 350 Aligned Residues 126 % Identity 24% Template d1trea_ SCOP info TIM beta/alpha-barrel Triosephosphate isomerase (TIM) Triosephosphate isomerase (TIM) Resolution 2.60

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		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100													.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.																					.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	A	E	V	T	E	A	G	A	Q	F	A	I	S	P	G	L	T	E	P	L	.	.	.	.	.	.	.	.	.	.	.	.	L	K	A	A	T	E	G	T	I	P	L	I	P	G	I	S	T	V	S	E	L	M	L	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	D	Y
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	A	M	L	K	D	I	G	A	Q	Y	I	I	I	G	H	S	E	R	R	T	Y	H	K	E	S	D	E	L	I	A	K	K	F	A	V	L	K	E	Q	G	L	T	P	V	L	C	I	G	E	T	E	A	E	N	E	A	G	K	T	E	E	V	C	A	R	Q	I	D	A	V	L	K	T	Q	G	A	A	A	F
Template Known Secondary structure									T							S								S																	T	T																T	T																			G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		128	.	130	.	.	.	.	.	.	.	.	.	140	.						.	.	.	.	.	.	.	.	150	.	.	.	.													.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.		.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.																						.
Query SS confidence																.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.																						.
Query Sequence		G	L	K	E	F	K	F	F	P	A	E	A	N	G	.	.	.	.	.	G	V	K	A	L	Q	A	I	A	G	P	F	S	.	.	.	.	.	.	.	.	.	.	.	.	Q	V	R	F	C	P	T	G	G	I	S	P	A	N	Y	R	D	Y	L	A	L	.	K	S	V	L	C	I	G	G	S	W	L	V	P	A
Query Conservation																.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.																						.
Alig confidence																.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.																						.
Template Conservation
Template Sequence		E	G	A	V	I	A	Y	E	P	V	W	A	I	G	T	G	K	S	A	T	P	A	Q	A	Q	A	V	H	K	F	I	R	D	H	I	A	K	V	D	A	N	I	A	E	Q	V	I	I	Q	Y	G	G	S	V	N	A	S	N	A	A	E	L	F	A	Q	P	D	I	D	G	A	L	V	G	G	A	S	L	K	A
Template Known Secondary structure		T	T								G	G	G	S	S	S	S																																				S				T	T	T						T	S	T	T							S	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	L	E	A	G	D	Y	D	R	I	T	K	L	A	R	E	A	V	E	G
Query Conservation
Alig confidence				.	.	.	.	.
Template Conservation				.	.	.	.	.
Template Sequence		D	A	.	.	.	.	.	F	A	V	I	V	K	A	A	E	A	A	K	Q	A
Template Known Secondary structure				.	.	.	.	.
Template Predicted Secondary structure				.	.	.	.	.
Template SS confidence
		242	.						.	.	.	.	.	.	250	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions