|   |
16 | . | . | . | 20 | |
. | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | |
|
. | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | |
|
|
. | . | . | 80 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  | . |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  | . | . |  |
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|
|  |  |  |  |  |  |  |  |  |  |  |
|
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|  |  |  |  |  |  |
|
|
| . | . | . |  |  |  |  |  |  |  |  |  |
|
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|
|
Query SS confidence |   |
|
|
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| . |
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| . |
. |
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| . |
. |
. |
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|
Query Sequence |   |
P | V | V | P | V | . |
I | V | V | K | K | L | E | H | A | V | P | M | A | K | A | L | V | A | G | G | V | R | V | L | E | V | . |
. |
T | L | R | T | E | C | A | V | D | A | I | R | A | I | A | K | E | V | P | E | A | I | V | G | A | G | T | V | L | N | . |
. |
. |
P | Q | Q | L | A | E | V | T | E | A | G | A | Q |
Query Conservation |   |
  |
|
|   |
| . |
|   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |   |   |
|
|
|   |   |
|
|
| . | . |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |
|
|   |   |   |
|   |   | . | . | . |   |
|   |   |   |   |
|   |   |
|
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|
|
Alig confidence |   |
|
|
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| . |
|
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|
| . |
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| . | . |
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|
| . | . | . |
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|
|
Template Conservation |   |
|   |
|   |
|
|
|
|   |   |   |   |   |   |
|
|   |   |   |   |   |   | . |   |   |   |
|
|   |
|
|
|
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |
|   |   |
|   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |
|
|
|
Template Sequence |   |
P | M | L | Q | V | A | L | D | N | Q | T | M | D | S | A | Y | E | T | T | R | L | I | . |
A | E | E | V | D | I | I | E | V | G | T | I | L | C | V | G | E | G | V | R | A | V | R | D | L | K | A | L | Y | P | H | K | I | V | L | A | D | A | K | I | A | D | A | G | K | I | L | S | R | M | C | F | E | A | N | A | D |
Template Known Secondary structure |   |
|  |  |  |  |  |  |
|
| S | S |  |  |  |  |  |  |  |  |  |  |  | . | G | G | G |
| S |  |  |  |  |
|  |  |  |  |  |  |  |
| T |  |  |  |  |  |  |  |  |  |
| T | T | S |  |  |  |  |  |  |  |  |
| S |
|  |  |  |  |  |  |  |  |  |  | T | T |
| S |
Template Predicted Secondary structure |   |
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  | . |
|
|
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|
|  |  |  |  |
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|
|  |  |  |  |  |  |  |  |  |  |
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|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
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|
|
Template SS confidence |   |
|
|
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  |   |
4 | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | |
. | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . |
  |
  |   |
90 | . | . | . | . | . | . | . | |
|
|
|
|
. | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | |
|
|
. | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | |
|
|
|
|
|
. | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | |
Predicted Secondary structure |   |
 |  |
|
|
|
|
|
| . | . | . | . | . |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  | . | . | . |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
| . | . | . | . | . | . |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
| . |
Query SS confidence |   |
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
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|
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|
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|
|
| . |
. |
. |
. |
. |
. |
|
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|
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|
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|
|
| . |
Query Sequence |   |
F | A | I | S | P | G | L | T | . |
. |
. |
. |
. |
E | P | L | L | K | A | A | T | E | G | T | I | P | L | I | P | G | I | . |
. |
. |
S | T | V | S | E | L | M | L | G | M | D | Y | G | L | K | E | F | K | F | F | P | . |
. |
. |
. |
. |
. |
A | E | A | N | G | G | V | K | A | L | Q | A | I | A | G | P | F | S | . |
Query Conservation |   |
  |
|   |   |   |   |   |   | . | . | . | . | . |   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |
|
| . | . | . |   |
|   |   |
|   |   |   |
|   |   |   |
|
|
|   |
|   |   |   |
| . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   | . |
Alig confidence |   |
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
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|
| . | . | . |
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|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
Template Conservation |   |
  |
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |
Template Sequence |   |
W | V | T | V | I | C | C | A | D | I | N | T | A | K | G | A | L | D | V | A | K | E | F | N | G | D | V | Q | I | E | L | T | G | Y | W | T | W | E | Q | A | Q | Q | W | R | D | A | G | I | G | Q | V | V | Y | H | R | S | R | D | A | Q | A | A | G | V | A | W | G | E | A | D | I | T | A | I | K | R | L | S | D | M |
Template Known Secondary structure |   |
 |  |  |  |  | T | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |
| S |
|
|
|  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |
|
|  |  |  |  |  | T | T |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
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|
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|
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|
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|
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|
|
|
|
|
|
|
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|
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|
|
|
|
|
|
  |   |
83 | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . |
  |
  |   |
155 | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . |
Predicted Secondary structure |   |
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
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|
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|
|
|
|
|
|
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|
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|
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|
|
|
|
|
|
Query Sequence |   |
Q | V | R | F | C | P | T | G | G | I | S | P | A | N | Y | R | D | Y | L | A | L | K | S | V | L | C | I | G | G | S | W | L | V | P | A | D | A | L | E | A | G | D | Y | D | R | I | T | K | L | A | R | E | A | V | E | G | A |
Query Conservation |   |
  |
|
|
|   |   |   |
|
|
|   |   |   |
|   |   |   |   |
|   |
|
|
|   |   |
|   |
|
|
|   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |
|
|
|
|
|
|
|   |   |
|   |
|
|   | . | . | . | . | . |   |   |
|   |   |   |   |   |   |
|   |
|   |
Template Sequence |   |
G | F | K | V | T | V | T | G | G | L | A | L | E | D | L | P | L | F | K | G | I | P | I | H | V | F | I | A | G | R | S | I | R | D | A | A | S | P | V | . |
. |
. |
. |
. |
E | A | A | R | Q | F | K | R | S | I | A | E | L |
Template Known Secondary structure |   |
T |
|  |  |  |  |  | S | S |
|
| G | G | G | G | G | G | G | T | T | S |
|
| S |  |  |  |  | S |  |  |  |  | T | S | S |
|  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|  |  |  |
|
|
|
|  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
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|
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|
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|
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|
|
|
|
|
|
  |   |
163 | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | |
|
|
|
|
. | . | . | . | . | . | . | . | 210 | . | . | . | . |
  |