Job Description P0A955 Confidence 91.44% Date Thu Jan 5 11:09:25 GMT 2012 Rank 437 Aligned Residues 112 % Identity 15% Template d1m6ja_ SCOP info TIM beta/alpha-barrel Triosephosphate isomerase (TIM) Triosephosphate isomerase (TIM) Resolution 1.50

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100													.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.																					.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	A	E	V	T	E	A	G	A	Q	F	A	I	S	P	G	L	T	E	P	L	.	.	.	.	.	.	.	.	.	.	.	.	L	K	A	A	T	E	G	T	I	P	L	I	P	G	I	S	T	V	S	E	L	M	L	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	D	Y
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	G	M	L	V	D	C	Q	V	P	Y	V	I	L	G	H	S	E	R	R	Q	I	F	H	E	S	N	E	Q	V	A	E	K	V	K	V	A	I	D	A	G	L	K	V	I	A	C	I	G	E	T	E	A	Q	R	I	A	N	Q	T	E	E	V	V	A	A	Q	L	K	A	I	N	N	A	I	S	K	E	A	W
Template Known Secondary structure								T	T							S								S																		T																T	T																	S		T	G	G	G
Template Predicted Secondary structure
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		128	.	130	.	.	.	.	.	.	.	.	.	140	.						.	.	.	.	.	.	.	.	150	.	.	.	.	.														.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.		.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Query SS confidence																.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Query Sequence		G	L	K	E	F	K	F	F	P	A	E	A	N	G	.	.	.	.	.	G	V	K	A	L	Q	A	I	A	G	P	F	S	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	V	R	F	C	P	T	G	G	I	S	P	A	N	Y	R	D	Y	L	A	.	L	K	S	V	L	C	I	G	G	S	W	L	V	P
Query Conservation																.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Alig confidence																.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Template Conservation
Template Sequence		K	N	I	I	L	A	Y	E	P	V	W	A	I	G	T	G	K	T	A	T	P	D	Q	A	Q	E	V	H	Q	Y	I	R	K	W	M	T	E	N	I	S	K	E	V	A	E	A	T	R	I	Q	Y	G	G	S	V	N	P	A	N	C	N	E	L	A	K	K	A	D	I	D	G	F	L	V	G	G	A	S	L	D
Template Known Secondary structure		G	G								G	G	G	S	S	S	S																							T								S						S				T	T	T						T	S	T	T							S	G	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		189	190	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	A	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		247	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions