Job Description P0A955 Confidence 96.41% Date Thu Jan 5 11:09:25 GMT 2012 Rank 269 Aligned Residues 189 % Identity 13% Template d1bxna1 SCOP info TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Resolution 2.70

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.													.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.							.	.	.	80	.	.	.	.
Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.
Query SS confidence																																.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.
Query Sequence		V	K	K	L	E	H	A	V	P	M	A	K	A	L	V	A	G	G	V	R	V	L	E	V	T	L	R	T	E	C	.	.	.	.	.	.	.	.	.	.	.	.	A	V	D	A	I	R	A	I	A	K	E	V	P	E	A	I	V	G	A	G	T	V	L	N	.	.	.	.	.	.	P	Q	Q	L	A	E	V	T
Query Conservation																																.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.
Alig confidence																																.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.
Template Conservation
Template Sequence		G	L	S	G	R	N	Y	G	R	V	V	Y	E	G	L	K	G	G	L	D	F	M	K	D	D	E	N	I	N	S	Q	P	F	M	H	W	R	D	R	F	L	F	V	M	D	A	V	N	K	A	S	A	A	T	G	E	V	K	G	S	Y	L	N	V	T	A	G	T	M	E	E	M	Y	R	R	A	E	F	A	K
Template Known Secondary structure		T																T	T		S						T	T		S	S		T	T	S																					T	S											S	S
Template Predicted Secondary structure
Template SS confidence
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
		85	.	.	.	.	90	.	.	.	.	.	.	.						.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.															.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140			.	.	.
Predicted Secondary structure															.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.
Query SS confidence															.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.
Query Sequence		E	A	G	A	Q	F	A	I	S	P	G	L	T	.	.	.	.	.	E	P	L	L	K	A	A	T	E	G	T	I	P	L	I	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	I	S	T	V	S	E	L	M	L	G	M	D	Y	G	L	K	E	F	K	F	F	P	A	E	A	N	.	.	G	G	V
Query Conservation															.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.
Alig confidence															.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.
Template Conservation
Template Sequence		S	L	G	S	V	I	I	M	V	D	L	I	V	G	W	T	C	I	Q	S	M	S	N	W	C	R	Q	N	D	M	I	L	H	L	H	R	A	G	H	G	T	Y	T	R	Q	K	N	H	G	V	S	F	R	V	I	A	K	W	L	R	L	A	G	V	D	H	M	H	T	G	T	A	V	G	K	L	E	G	D	P
Template Known Secondary structure			T	T		S						G	G	G														T	T	T								T	T	T					S		T	T	S	S														T		S							T	T	S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.
		144	.	.	.	.	.	150	.	.	.																							.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.		.	.	.	.	.		.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.						.
Query SS confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.						.
Query Sequence		K	A	L	Q	A	I	A	G	P	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	Q	V	R	F	C	P	T	G	G	I	S	P	A	N	Y	R	D	Y	L	.	A	L	K	S	V	.	L	C	I	G	G	S	W	L	V	P	A	D	A	L	E	A	G	D	Y	D	R
Query Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.						.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.						.
Template Conservation
Template Sequence		L	T	V	Q	G	Y	Y	N	V	C	R	D	A	Y	T	Q	T	D	L	T	R	G	L	F	F	D	Q	D	W	A	S	L	R	K	V	M	P	V	A	S	G	G	I	H	A	G	Q	M	H	Q	L	I	H	L	F	G	D	D	V	V	L	Q	F	G	G	G	T	I	G	H	P	Q	G	I	Q	A	G	A	T	A
Template Known Secondary structure														S					B	G	G	G	T	B		S					T	T											S			G	G	G										S	S											T		T	T
Template Predicted Secondary structure
Template SS confidence
		342	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.
		200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	T	K	L	A	R	E	A	V	E	G	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	R	V	A	L	E	A	M	V	L	A	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		422	.	.	.	.	.	.	.	430	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions