Job Description P0A955 Confidence 96.45% Date Thu Jan 5 11:09:25 GMT 2012 Rank 265 Aligned Residues 185 % Identity 14% Template d1bwva1 SCOP info TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Resolution 2.40

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.																.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.		.						.	.	.	80	.
Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.		.	.	.	.	.
Query SS confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.		.	.	.	.	.
Query Sequence		V	K	K	L	E	H	A	V	P	M	A	K	A	L	V	A	G	G	V	R	V	L	E	V	T	L	R	T	E	C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	V	D	A	I	R	A	I	A	K	E	V	P	E	A	I	V	G	A	G	T	V	L	.	N	.	.	.	.	.	P	Q	Q	L	A
Query Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.		.	.	.	.	.
Alig confidence																								.	.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.		.	.	.	.	.
Template Conservation																								.	.	.	.
Template Sequence		G	L	S	G	K	N	Y	G	R	V	V	Y	E	A	L	K	G	G	L	D	F	V	.	.	.	.	D	D	E	N	I	N	S	Q	P	F	M	R	W	R	E	R	Y	L	F	T	M	E	A	V	N	K	A	S	A	A	T	G	E	V	K	G	H	Y	L	N	V	T	A	A	T	M	E	E	M	Y	A	R	A	N
Template Known Secondary structure																			T		S	B		.	.	.	.			T	T		S	S	B	T	T	B																					T	S			B								S	S
Template Predicted Secondary structure																								.	.	.	.
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200					.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.						.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.															.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure																		.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	V	T	E	A	G	A	Q	F	A	I	S	P	G	L	T	.	.	.	.	.	E	P	L	L	K	A	A	T	E	G	T	I	P	L	I	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	I	S	T	V	S	E	L	M	L	G	M	D	Y	G	L	K	E	F	K	F	F	P	A	E	A	N	G	G
Query Conservation																		.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	A	K	E	L	G	S	V	I	I	M	I	D	L	V	I	G	Y	T	A	I	Q	T	M	A	K	W	A	R	D	N	D	M	I	L	H	L	H	R	A	G	N	S	T	Y	S	R	Q	K	N	H	G	M	N	F	R	V	I	C	K	W	M	R	M	A	G	V	D	H	I	H	A	G	T	V	V	G	K	L	E
Template Known Secondary structure						T	T		S						G	G	G															T	T								T	T	T					S		T	T	S	S														T		S							S	S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
				143	.	.	.	.	.	.	150	.	.	.																							.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.		.	.	.	.	.		.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure		.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.						.
Query SS confidence		.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.						.
Query Sequence		.	.	V	K	A	L	Q	A	I	A	G	P	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	Q	V	R	F	C	P	T	G	G	I	S	P	A	N	Y	R	D	Y	L	.	A	L	K	S	V	.	L	C	I	G	G	S	W	L	V	P	A	D	A	L	E	A	G	D
Query Conservation		.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.						.
Alig confidence		.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.						.
Template Conservation
Template Sequence		G	D	P	I	I	T	R	G	F	Y	K	T	L	L	L	P	K	L	E	R	N	L	Q	E	G	L	F	F	D	M	E	W	A	S	L	R	K	V	M	P	V	A	S	G	G	I	H	A	G	Q	M	H	Q	L	I	H	Y	L	G	E	D	V	V	L	Q	F	G	G	G	T	I	G	H	P	D	G	I	Q	A	G
Template Known Secondary structure																	S					B	T	T	T	T	B		S					T	T										S	S			T	T	S										S	S						S					T		T	T
Template Predicted Secondary structure
Template SS confidence
		337	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	D	R	I	T	K	L	A	R	E	A	V	E	G	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	T	A	N	R	V	A	L	E	A	M	I	L	A	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		417	.	.	420	.	.	.	.	.	.	.	.	.	430	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions