Job Description P0A955 Confidence 92.70% Date Thu Jan 5 11:09:25 GMT 2012 Rank 416 Aligned Residues 187 % Identity 11% Template c3t4cD_ PDB info PDB header:transferase Chain: D: PDB Molecule:2-dehydro-3-deoxyphosphooctonate aldolase 1; PDBTitle: crystal structure of 2-dehydro-3-deoxyphosphooctonate aldolase from2 burkholderia ambifaria Resolution 1.95 Å

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40				.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.				.	.
Predicted Secondary structure																				.	.	.																																																							.	.	.
Query SS confidence																				.	.	.																																																							.	.	.
Query Sequence		V	K	K	L	E	H	A	V	P	M	A	K	A	L	V	A	G	G	.	.	.	V	R	V	L	E	V	T	L	R	T	E	C	A	V	D	A	I	R	A	I	A	K	E	V	P	E	A	I	V	G	A	G	T	V	L	N	P	Q	Q	L	A	E	V	T	E	A	G	A	Q	F	A	I	S	P	.	.	.	G	L
Query Conservation																				.	.	.																																																							.	.	.
Alig confidence																				.	.	.																														.	.																.								.	.	.
Template Conservation																																																				.	.																.
Template Sequence		V	E	S	E	Q	M	T	I	D	T	A	G	R	L	K	E	I	C	A	K	L	N	V	P	F	I	Y	K	S	S	M	D	E	G	L	R	I	L	G	E	V	K	R	Q	L	G	L	P	V	L	.	.	T	D	V	H	S	I	D	E	I	E	Q	V	A	S	V	.	V	D	V	L	Q	T	P	A	F	L	C	R
Template Known Secondary structure																						T	T																								T					.	.					S									T	T	.		S						G	G	G	T	T
Template Predicted Secondary structure																																																				.	.																.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.			.	.	.	.	.	.	.	80	.	.	.	.	.	.	.		.	.	90	.	.	.	.	.	.	.	.	.
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.											.	.	120	.	.	.	.	.	.	.				.	.	130	.	.	.	.	.	.	.	.	.	140	.	.								.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.											.	.	.																.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.											.	.	.																.	.	.	.	.	.	.
Query Sequence		T	E	P	L	L	K	A	A	T	E	G	T	I	P	L	I	P	G	I	S	T	.	.	.	.	.	.	.	.	.	.	V	S	E	L	M	L	G	M	D	Y	.	.	.	G	L	K	E	F	K	F	F	P	A	E	A	N	G	G	.	.	.	.	.	.	.	V	K	A	L	Q	A	I	A	G	P	F	S	Q	V
Query Conservation																							.	.	.	.	.	.	.	.	.	.											.	.	.																.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.											.	.	.																.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	T	D	F	I	H	A	C	A	R	S	G	K	P	V	N	I	K	K	G	Q	F	L	A	P	H	D	M	K	N	V	I	D	K	A	R	E	A	A	R	E	A	G	L	S	E	D	R	F	M	A	C	E	R	G	V	S	F	G	Y	N	N	L	V	S	D	M	R	S	L	A	I	M	R	E	T	S	A	P	V
Template Known Secondary structure											T	T	S	S								T	T	S		G	G	G															T	T			S													S	S	S												G	G	G	G	S	S
Template Predicted Secondary structure
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
		157	.	.	160	.	.						.	.	.				.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.								.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure								.	.	.	.	.				.	.	.																							.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.				.	.	.																							.	.	.	.	.	.	.
Query Sequence		R	F	C	P	T	G	.	.	.	.	.	G	I	S	.	.	.	P	A	N	Y	R	D	Y	L	A	L	K	S	V	L	C	I	G	G	S	W	L	V	.	.	.	.	.	.	.	P	A	D	A	L	E	A	G	D	Y	D	R	I	T	K	L	A	R	E	A	V	E	G	A	K
Query Conservation								.	.	.	.	.				.	.	.																							.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.				.	.	.																							.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	F	D	A	T	H	S	V	Q	L	P	G	Q	R	E	F	V	P	V	L	A	R	A	A	V	A	T	G	V	A	G	L	F	M	E	T	H	P	N	P	A	E	A	K	S	D	G	P	N	A	V	P	L	N	R	M	G	A	L	L	E	T	L	V	T	L	D	Q	A	V	K
Template Known Secondary structure									T						T	T															S								S		T	T	T			T	T	S		S				G	G	G
Template Predicted Secondary structure
Template SS confidence
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions