Job Description P0A955 Confidence 97.42% Date Thu Jan 5 11:09:25 GMT 2012 Rank 215 Aligned Residues 192 % Identity 12% Template c3stgA_ PDB info PDB header:transferase Chain: A: PDB Molecule:2-dehydro-3-deoxyphosphooctonate aldolase; PDBTitle: crystal structure of a58p, del(n59), and loop 7 truncated mutant of 3-2 deoxy-d-manno-octulosonate 8-phosphate synthase (kdo8ps) from3 neisseria meningitidis Resolution 2.20 Å

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.					.	.	40	.	.	.	.	.	.		.	.	.	50	.	.														.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.										.							.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.										.							.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	V	P	V	I	V	V	K	K	L	E	H	A	V	P	M	A	K	A	L	V	.	.	.	.	A	G	G	V	R	V	L	E	V	.	T	L	R	T	E	C	.	.	.	.	.	.	.	.	.	.	.	.	.	A	V	D	A	I	R	A	I	A	K	E	V	P	E	A	I	V	G	A	G	T	V	L	N	P	Q
Query Conservation																							.	.	.	.										.							.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.										.							.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Template Conservation																																																																									.	.
Template Sequence		F	G	G	I	N	V	L	E	S	L	D	S	T	L	Q	T	C	A	H	Y	V	E	V	T	R	K	L	G	I	P	Y	I	F	K	A	S	F	D	K	P	R	S	S	I	H	S	Y	R	G	V	G	L	E	E	G	L	K	I	F	E	K	V	K	A	E	F	G	I	P	V	I	.	.	T	D	V	H	E	P	H
Template Known Secondary structure																													T									S			T	T	S		T	T	S				S																						.	.					S
Template Predicted Secondary structure																																																																									.	.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.			90	.	.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.				.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.			.	.	.		.	.	.	120	.	.	.	.	.	.					.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure																		.	.	.																				.	.				.											.	.	.	.																	.	.	.	.	.	.
Query SS confidence																		.	.	.																				.	.				.											.	.	.	.																	.	.	.	.	.	.
Query Sequence		Q	L	A	E	V	T	E	A	G	A	Q	F	A	I	S	P	.	.	.	G	L	T	E	P	L	L	K	A	A	T	E	G	T	I	P	L	I	P	.	.	G	I	S	.	T	V	S	E	L	M	L	G	M	D	.	.	.	.	Y	G	L	K	E	F	K	F	F	P	A	E	A	N	G	G	.	.	.	.	.	.
Query Conservation																		.	.	.																				.	.				.											.	.	.	.																	.	.	.	.	.	.
Alig confidence										.								.	.	.																				.	.				.											.	.	.	.																	.	.	.	.	.	.
Template Conservation										.
Template Sequence		Q	C	Q	P	V	A	E	V	.	C	D	V	I	Q	L	P	A	F	L	A	R	Q	T	D	L	V	V	A	M	A	K	T	G	N	V	V	N	I	K	K	P	Q	F	L	S	P	S	Q	M	K	N	I	V	E	K	F	H	E	A	G	N	G	K	L	I	L	C	E	R	G	S	S	F	G	Y	D	N	L	V	V
Template Known Secondary structure										.		S						G	G	G	T	T																					T	T	S		G	G	G											T	T														S	S	S
Template Predicted Secondary structure										.
Template SS confidence
		97	.	.	100	.	.	.	.		.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
			143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.								.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure		.																											.	.	.	.	.	.	.
Query SS confidence		.																											.	.	.	.	.	.	.
Query Sequence		.	V	K	A	L	Q	A	I	A	G	P	F	S	Q	V	R	F	C	P	T	G	G	I	S	P	A	N	.	.	.	.	.	.	.	Y	R	D	Y	L	A	L	K	S	V	L	C	I	G	G	S	W	L	V	P	A	D	A	L	E	A	G	D	Y	D	R	I	T	K	L	A	R	E	A	V	E	G	A	K
Query Conservation		.																											.	.	.	.	.	.	.
Alig confidence		.																											.	.	.	.	.	.	.																		.
Template Conservation																																																					.
Template Sequence		D	M	L	G	F	G	V	M	K	Q	T	C	G	N	L	P	V	I	F	D	V	T	H	S	L	G	R	R	A	Q	A	L	D	L	A	L	A	G	M	A	T	R	L	A	G	L	F	L	E	S	H	.	P	D	P	S	A	L	P	L	H	L	L	E	D	F	L	I	R	I	K	A	L	D	D	L	I	K
Template Known Secondary structure			T										T	T	T							T	T	T	T		S	S	G	G	G										T	T			S								.					S			G	G	G
Template Predicted Secondary structure																																																					.
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.		.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions