Return to main results Retrieve Phyre Job Id

Job DescriptionP0A955
Confidence93.91%DateThu Jan 5 11:09:25 GMT 2012
Rank387Aligned Residues158
% Identity15%Templatec3sjnB_
PDB info PDB header:lyaseChain: B: PDB Molecule:mandelate racemase/muconate lactonizing protein; PDBTitle: crystal structure of enolase spea_3858 (target efi-500646) from2 shewanella pealeana with magnesium bound
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   20.........30.........40........ .50.........60.... .....70.... ..... 80......
Predicted Secondary structure 







.....




.



...

....
Query SS confidence 




























. . . . .















.









. . .




. . . .






Query Sequence  VIVVKKLEHAVPMAKALVAGGVRVLEVTL. . . . . RTECAVDAIRAIAKEV. PEAIVGAGTV. . . LNPQQ. . . . LAEVTEA
Query Conservation 

           


   


  


  .....        
  
    .    

   
...   
 ....   
  
Alig confidence 




























.....















.









...




....






Template Conservation         
            
    


 
    
   
   
  

   
    
 



        
      
   
Template Sequence  FIPADKPEDNVAIVQGLKDQGFSSIKFGGGVMGDDPDTDYAIVKAVREAAGPEMEVQIDLASKWHTCGHSAMMAKRLEEF
Template Known Secondary structure 


SSGGGGT
SSTTTTT

SSS
TTTT
STTTT
Template Predicted Secondary structure 





























Template SS confidence 















































































   140.........150.........160.........170.........180.........190.........200.........210.........
 
   87..90...... ...100.........110.... .....120........ .130.........140. ........150........
Predicted Secondary structure 







...




..



.








..




Query SS confidence 









. . .

















. .













.












. .
















Query Sequence  GAQFAISPGL. . . TEPLLKAATEGTIPLIPG. . ISTVSELMLGMDYG. LKEFKFFPAEANG. . GVKALQAIAGPFSQVRF
Query Conservation 


 
     ...   
       
     
..
 
  
   
   
.

 
   
     ..    
  
      


Alig confidence 









...

















..













.












..











.



Template Conservation   
  



    
      
     



 


          
     
    
    


         
   .

  
Template Sequence  NLNWIEEPVLADSLISYEKLSRQVSQKIAGGESLTTRYEFQEFITKSNADIVQPDITRCGGITEMKKIYDIAQMN. GTQL
Template Known Secondary structure  T
S
SS
TT
TT
SS
TT



S

BTTTSST.T
Template Predicted Secondary structure 































.


Template SS confidence 















































































   220.........230.........240.........250.........260.........270.........280.........290.... ....
 
   159160.........170........
Predicted Secondary structure 








Query SS confidence 



















Query Sequence  CPTGGISPANYRDYLALKSV
Query Conservation     


   
    
 


 
Alig confidence 



















Template Conservation        
 
   
   



Template Sequence  IPHGFSTGILLHASVHFLAA
Template Known Secondary structure 

B

S
T
Template Predicted Secondary structure 



Template SS confidence 



















   299300.........310........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions