Job Description P0A955 Confidence 97.61% Date Thu Jan 5 11:09:25 GMT 2012 Rank 200 Aligned Residues 174 % Identity 17% Template c3qfwB_ PDB info PDB header:lyase Chain: B: PDB Molecule:ribulose-1,5-bisphosphate carboxylase/oxygenase large PDBTitle: crystal structure of rubisco-like protein from rhodopseudomonas2 palustris Resolution 1.79 Å

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.													.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.						.	.	.	80	.	.	.	.	.
Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.
Query SS confidence																																.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.
Query Sequence		V	K	K	L	E	H	A	V	P	M	A	K	A	L	V	A	G	G	V	R	V	L	E	V	T	L	R	T	E	C	.	.	.	.	.	.	.	.	.	.	.	.	A	V	D	A	I	R	A	I	A	K	E	V	P	E	A	I	V	G	A	G	T	V	L	N	.	.	.	.	.	P	Q	Q	L	A	E	V	T	E
Query Conservation																																.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.
Alig confidence																																.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.
Template Conservation
Template Sequence		G	L	S	P	A	A	L	A	S	I	A	H	Q	L	A	L	G	G	V	D	L	I	K	D	D	H	G	L	A	D	Q	A	F	S	P	F	A	E	R	A	A	A	V	G	K	A	V	R	E	A	N	A	A	R	G	G	R	T	L	Y	A	P	N	I	S	G	T	L	D	D	M	R	R	Q	L	G	V	I	R	D
Template Known Secondary structure		T	S															T	T		S						T	T		S	S		T	T	S																					T								B			S	S
Template Predicted Secondary structure
Template SS confidence
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
		86	.	.	.	90	.	.	.	.	.	.	.			.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.												.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.							.	.	.	.
Predicted Secondary structure														.	.																						.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.
Query SS confidence														.	.																						.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.
Query Sequence		A	G	A	Q	F	A	I	S	P	G	L	T	.	.	E	P	L	L	K	A	A	T	E	G	T	I	P	L	I	P	G	I	S	T	V	.	.	.	.	.	.	.	.	.	.	.	S	E	L	M	L	G	M	D	Y	G	L	K	E	F	K	F	F	P	A	E	A	N	G	G	.	.	.	.	.	.	V	K	A	L
Query Conservation														.	.																						.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.
Alig confidence														.	.																						.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.
Template Conservation
Template Sequence		E	G	I	G	A	V	L	V	A	P	M	I	V	G	V	S	N	F	H	A	I	V	K	E	A	A	G	L	V	V	V	A	H	P	A	M	A	G	A	A	K	I	A	A	P	L	L	L	G	R	L	F	R	L	F	G	A	D	A	T	V	F	P	N	Y	G	G	R	F	A	Y	S	T	A	S	C	L	A	L	A
Template Known Secondary structure			T																					T	T		T	T								T	T	T	T	S	S		B							T							T		S							T	T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
		147	.	.	150	.	.	.	.	.	.	.				.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.		.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure													.	.	.																	.
Query SS confidence													.	.	.																	.
Query Sequence		Q	A	I	A	G	P	F	S	Q	V	R	.	.	.	F	C	P	T	G	G	I	S	P	A	N	Y	R	D	Y	L	.	A	L	K	S	V	L	C	I	G	G	S	W	L	V	P	A	D	A	L	E	A	G	D	Y	D	R	I	T	K	L	A	R	E	A	V	E	G	A
Query Conservation													.	.	.																	.
Alig confidence													.	.	.																	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	A	A	R	D	P	F	G	K	L	N	A	C	I	P	T	P	A	G	G	I	M	L	Q	R	V	N	E	L	L	R	F	Y	G	Q	D	V	M	L	L	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	L	T	E	Q	A	S	R	F	V	N	K	V
Template Known Secondary structure						S			T	T										S	S			T	T	T										S	S						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.																.	.	.	.	.	.	.	350	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions