Job Description P0A955 Confidence 88.90% Date Thu Jan 5 11:09:25 GMT 2012 Rank 486 Aligned Residues 163 % Identity 15% Template c3q45E_ PDB info PDB header:isomerase Chain: E: PDB Molecule:mandelate racemase/muconate lactonizing enzyme family; PDBTitle: crystal structure of dipeptide epimerase from cytophaga hutchinsonii2 complexed with mg and dipeptide d-ala-l-val Resolution 3.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.			.	.	.	60	.	.	.	.	.	.				.	.	.	70	.	.	.	.	.	.	.	.	.					80	.	.	.	.	.	.
Predicted Secondary structure																																											.	.											.	.	.														.	.	.	.
Query SS confidence																																											.	.											.	.	.														.	.	.	.
Query Sequence		P	V	V	P	V	I	V	V	K	K	L	E	H	A	V	P	M	A	K	A	L	V	A	G	G	V	R	V	L	E	V	T	L	R	T	E	C	A	V	D	A	.	.	I	R	A	I	A	K	E	V	P	E	.	.	.	A	I	V	G	A	G	T	V	L	N	P	Q	Q	.	.	.	.	L	A	E	V	T	E	A
Query Conservation																																											.	.											.	.	.														.	.	.	.
Alig confidence																																											.	.											.	.	.														.	.	.	.
Template Conservation
Template Sequence		Q	T	D	Y	T	V	S	I	D	E	P	H	K	M	A	A	D	A	V	Q	I	K	K	N	G	F	E	I	I	K	V	K	V	G	G	S	K	E	L	D	V	E	R	I	R	M	I	R	E	A	A	G	D	S	I	T	L	R	I	D	A	N	Q	G	W	S	V	E	T	A	I	E	T	L	T	L	L	E	P	Y
Template Known Secondary structure			B						S																T	T		S								S																		S	S	S							T	T		B													G	G	G
Template Predicted Secondary structure
Template SS confidence
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
		87	.	.	90	.	.	.	.	.	.				.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.			.	.	.	.	.	120	.	.	.	.	.	.	.	.		.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.		.	.	.	.	.
Predicted Secondary structure												.	.	.																			.	.															.																											.
Query SS confidence												.	.	.																			.	.															.																											.
Query Sequence		G	A	Q	F	A	I	S	P	G	L	.	.	.	T	E	P	L	L	K	A	A	T	E	G	T	I	P	L	I	P	G	.	.	I	S	T	V	S	E	L	M	L	G	M	D	Y	G	.	L	K	E	F	K	F	F	P	A	E	A	N	G	G	V	K	A	L	Q	A	I	A	G	P	F	S	.	Q	V	R	F	C
Query Conservation												.	.	.																			.	.															.																											.
Alig confidence												.	.	.																			.	.															.																											.
Template Conservation
Template Sequence		N	I	Q	H	C	E	E	P	V	S	R	N	L	Y	T	A	L	P	K	I	R	Q	A	C	R	I	P	I	M	A	D	E	S	C	C	N	S	F	D	A	E	R	L	I	Q	I	Q	A	C	D	S	F	N	L	K	L	S	K	S	A	G	I	T	N	A	L	N	I	I	R	L	A	E	Q	A	H	M	P	V	Q
Template Known Secondary structure				S						B		G	G	G	G	G	G									S	S					S	T	T			S										T	T			S						T	T	T	T	T	S														T	T
Template Predicted Secondary structure
Template SS confidence
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
		160	.	.	.	.		.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure							.
Query SS confidence							.
Query Sequence		P	T	G	G	I	.	S	P	A	N	Y	R	D	Y	L	A	L	K	S	V
Query Conservation							.
Alig confidence							.
Template Conservation
Template Sequence		V	G	G	F	L	E	S	R	L	G	F	T	A	A	A	H	V	A	L	V
Template Known Secondary structure					S	S														T	S
Template Predicted Secondary structure
Template SS confidence
		291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions