Job Description P0A955 Confidence 98.67% Date Thu Jan 5 11:09:25 GMT 2012 Rank 138 Aligned Residues 157 % Identity 13% Template c3ngjC_ PDB info PDB header:lyase Chain: C: PDB Molecule:deoxyribose-phosphate aldolase; PDBTitle: crystal structure of a putative deoxyribose-phosphate aldolase from2 entamoeba histolytica Resolution 1.70 Å

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		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.												.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.	.	.														.	.	.
Query SS confidence																																																							.	.	.	.	.	.	.	.	.	.	.														.	.	.
Query Sequence		K	K	L	E	H	A	V	P	M	A	K	A	L	V	A	G	G	V	R	V	L	E	V	T	L	R	T	E	C	A	V	D	A	I	R	A	I	A	K	E	V	P	E	A	I	V	G	A	G	T	V	L	N	.	.	.	.	.	.	.	.	.	.	.	P	Q	Q	L	A	E	V	T	E	A	G	A	Q	.	.	.
Query Conservation																																																							.	.	.	.	.	.	.	.	.	.	.														.	.	.
Alig confidence																											.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.														.	.	.
Template Conservation																											.	.	.	.	.	.
Template Sequence		A	T	E	E	Q	I	R	K	L	C	S	E	A	A	E	Y	K	F	A	S	V	C	V	N	P	.	.	.	.	.	.	T	W	V	P	L	C	A	E	L	L	K	G	T	G	V	K	V	C	T	V	I	G	F	P	L	G	A	T	P	S	E	V	K	A	Y	E	T	K	V	A	V	E	Q	G	A	E	E	V	D
Template Known Secondary structure																		T		S						G	.	.	.	.	.	.	G	G								T	T	T	S	S								S	T	T	T			S															T	T		S
Template Predicted Secondary structure																											.	.	.	.	.	.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.							.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
								90	.	.	.	.	.	.	.							.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.			.	.	.	120					.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.			.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.									.	.	.	.	.	.																				.	.					.	.	.	.																							.	.
Query SS confidence		.	.	.	.	.	.									.	.	.	.	.	.																				.	.					.	.	.	.																							.	.
Query Sequence		.	.	.	.	.	.	F	A	I	S	P	G	L	T	.	.	.	.	.	.	E	P	L	L	K	A	A	T	E	G	T	I	P	L	I	P	G	I	S	.	.	T	V	S	E	.	.	.	.	L	M	L	G	M	D	Y	G	L	K	E	F	K	F	F	P	A	E	A	N	G	G	.	.	V	K	A	L	Q	A	I
Query Conservation		.	.	.	.	.	.									.	.	.	.	.	.																				.	.					.	.	.	.																							.	.
Alig confidence		.	.	.	.	.	.									.	.	.	.	.	.																				.	.					.	.	.	.																							.	.
Template Conservation
Template Sequence		M	V	I	N	I	G	M	V	K	A	K	K	Y	D	D	V	E	K	D	V	K	A	V	V	D	A	S	G	K	A	L	T	K	V	I	I	E	C	C	Y	L	T	N	E	E	K	V	E	V	C	K	R	C	V	A	A	G	A	E	Y	V	K	T	S	T	G	F	G	T	H	G	A	T	P	E	D	V	K	L	M
Template Known Secondary structure											T	T																	T	T	S								G	G	G	S																T		S							S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
		150	.	.	.	.		.	.	.	.	.	160	.	.	.	.		.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure							.											.
Query SS confidence							.											.
Query Sequence		A	G	P	F	S	.	Q	V	R	F	C	P	T	G	G	I	.	S	P	A	N	Y	R	D	Y	L	A	L	K	S	V	L	C	I	G	G	S	W	L
Query Conservation							.											.
Alig confidence							.											.
Template Conservation
Template Sequence		K	D	T	V	G	D	K	A	L	V	K	A	A	G	G	I	R	T	F	D	D	A	M	K	M	I	N	N	G	A	S	R	I	G	A	S	A	G	I
Template Known Secondary structure						T	T	S	S						S	S			S										T	T							S
Template Predicted Secondary structure
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions