Job Description P0A955 Confidence 93.42% Date Thu Jan 5 11:09:25 GMT 2012 Rank 399 Aligned Residues 182 % Identity 16% Template c3lerA_ PDB info PDB header:lyase Chain: A: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from2 campylobacter jejuni subsp. jejuni nctc 11168 Resolution 1.84 Å

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.									.	.	.	.	.	.	.	60	.	.	.	.	.	.					.	.	.	70	.	.	.	.	.	.	.	.				.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																														.	.	.	.	.	.	.	.															.	.	.	.													.	.	.
Query SS confidence																														.	.	.	.	.	.	.	.															.	.	.	.													.	.	.
Query Sequence		K	L	E	H	A	V	P	M	A	K	A	L	V	A	G	G	V	R	V	L	E	V	T	L	R	T	E	C	.	.	.	.	.	.	.	.	A	V	D	A	I	R	A	I	A	K	E	V	P	E	.	.	.	.	A	I	V	G	A	G	T	V	L	N	P	Q	.	.	.	Q	L	A	E	V	T	E	A	G	A	Q
Query Conservation																														.	.	.	.	.	.	.	.															.	.	.	.													.	.	.
Alig confidence																														.	.	.	.	.	.	.	.															.	.	.	.													.	.	.
Template Conservation
Template Sequence		D	E	Q	S	Y	A	R	L	I	K	R	Q	I	E	N	G	I	D	A	V	V	P	V	G	T	T	G	E	S	A	T	L	T	H	E	E	H	R	T	C	I	E	I	A	V	E	T	C	K	G	T	K	V	K	V	L	A	G	A	G	S	N	A	T	H	E	A	V	G	L	A	K	F	A	K	E	H	G	A	D
Template Known Secondary structure															T	T	T						T	T	S	T	T	T	T	G	G	G	S																	T	T	S	S										S	S														T	T		S
Template Predicted Secondary structure
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
		90	.	.	.							.	.	.	.	.	.	100	.	.	.					.	.	.	.	.	.	110	.	.	.					.					.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure						.	.	.	.	.	.											.	.	.	.											.	.	.	.		.	.	.	.
Query SS confidence						.	.	.	.	.	.											.	.	.	.											.	.	.	.		.	.	.	.
Query Sequence		F	A	I	S	.	.	.	.	.	.	P	G	L	T	E	P	L	L	K	A	.	.	.	.	A	T	E	G	T	I	P	L	I	P	.	.	.	.	G	.	.	.	.	I	S	T	V	S	E	L	M	L	G	M	D	Y	G	L	K	E	F	K	F	F	P	A	E	A	N	G	G	V	K	A	L	Q	A	I	A	G
Query Conservation						.	.	.	.	.	.											.	.	.	.											.	.	.	.		.	.	.	.
Alig confidence						.	.	.	.	.	.											.	.	.	.											.	.	.	.		.	.	.	.																						.	.	.
Template Conservation																																																																		.	.	.
Template Sequence		G	I	L	S	V	A	P	Y	Y	N	K	P	T	Q	Q	G	L	Y	E	H	Y	K	A	I	A	Q	S	V	D	I	P	V	L	L	Y	N	V	P	G	R	T	G	C	E	I	S	T	D	T	I	I	K	L	F	R	D	C	E	N	I	Y	G	V	E	.	.	.	A	S	G	N	I	D	K	C	V	D	L	L	A
Template Known Secondary structure										S	S																			S	S												S																T	T						.	.	.		S	S
Template Predicted Secondary structure																																																																		.	.	.
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.				.	.	.	170	.	.	.	.	.	.	.	.	.
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190								.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure																																									.	.	.	.	.	.	.
Query SS confidence																																									.	.	.	.	.	.	.
Query Sequence		P	F	S	Q	V	R	F	C	P	T	G	G	I	S	P	A	N	Y	R	D	Y	L	A	L	K	S	V	L	C	I	G	G	S	W	L	V	P	A	D	.	.	.	.	.	.	.	A	L	E	A	G	D	Y	D	R	I	T	K	L	A	R	E	A	V	E	G	A	K
Query Conservation																																									.	.	.	.	.	.	.
Alig confidence														.	.	.																									.	.	.	.	.	.	.
Template Conservation														.	.	.
Template Sequence		H	E	P	R	X	X	L	I	S	G	E	D	.	.	.	A	I	N	Y	P	I	L	S	N	G	G	K	G	V	I	S	V	T	S	N	L	L	P	D	X	I	S	A	L	T	H	F	A	L	D	E	N	Y	K	E	A	K	K	I	N	D	E	L	Y	N	I	N	K
Template Known Secondary structure				T	T	S	B						G	.	.	.	G	G							T	T							S	G	G	G	T														T	T												T
Template Predicted Secondary structure														.	.	.
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.				.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions