Job Description P0A955 Confidence 98.80% Date Thu Jan 5 11:09:25 GMT 2012 Rank 127 Aligned Residues 182 % Identity 16% Template c3ldvB_ PDB info PDB header:lyase Chain: B: PDB Molecule:orotidine 5'-phosphate decarboxylase; PDBTitle: 1.77 angstrom resolution crystal structure of orotidine 5'-2 phosphate decarboxylase from vibrio cholerae o1 biovar3 eltor str. n16961 Resolution 1.77 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.			.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.					.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure																																			.	.																																.	.	.	.
Query SS confidence																																			.	.																																.	.	.	.
Query Sequence		T	G	P	V	V	P	V	I	V	V	K	K	L	E	H	A	V	P	M	A	K	A	L	V	A	G	G	V	R	V	L	E	V	.	.	T	L	R	T	E	C	A	V	D	A	I	R	A	I	A	K	E	V	P	E	A	I	V	G	A	G	T	V	L	N	P	.	.	.	.	Q	Q	L	A	E	V	T	E	A	G
Query Conservation																																			.	.																																.	.	.	.
Alig confidence																									.										.	.																																.	.	.	.
Template Conservation																									.
Template Sequence		D	P	K	V	I	V	A	L	D	Y	D	N	L	A	D	A	L	A	F	V	D	K	I	.	D	P	S	T	C	R	L	K	V	G	K	E	M	F	T	L	F	G	P	D	F	V	R	E	L	H	K	R	G	F	S	V	F	L	D	L	K	F	H	D	I	P	N	T	C	S	K	A	V	K	A	A	A	E	L	G
Template Known Secondary structure												S										T	T	S	.		T	T	S																								T	T											S																T
Template Predicted Secondary structure																									.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.		.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		88	.	90	.	.	.	.	.	.						.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.								.	.	.	.	120	.																		.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.																				.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.																				.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	Q	F	A	I	S	P	G	L	.	.	.	.	.	T	E	P	L	L	K	A	A	T	E	G	T	I	P	L	I	P	G	I	.	.	.	.	.	.	.	S	T	V	S	E	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	L	G	M	D	Y	G	L	K	E	F	K	F	F	P	A	E
Query Conservation											.	.	.	.	.																				.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.																				.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	W	M	V	N	V	H	A	S	G	G	E	R	M	M	A	A	S	R	E	I	L	E	P	Y	G	K	E	R	P	L	L	I	G	V	T	V	L	T	S	M	E	S	A	D	L	Q	G	I	G	I	L	S	A	P	Q	D	H	V	L	R	L	A	T	L	T	K	N	A	G	L	D	G	V	V	C	S	A	Q	E
Template Known Secondary structure			S						G	G	G													G	G	G	G	G	G	S								S		T	T									T	T			S																T	T								T	T	T
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.						.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure																												.	.	.	.	.
Query SS confidence																												.	.	.	.	.
Query Sequence		A	N	G	G	V	K	A	L	Q	A	I	A	G	P	F	S	Q	V	R	F	C	P	T	G	G	I	.	.	.	.	.	S	P	A	N	Y	R	D	Y	L	A	L	K	S	V	L	C	I	G	G	S	W	L	V	P	A	D	A	L	E	A	G	D	Y	D	R	I	T	K	L	A	R	E	A	V	E	G	A
Query Conservation																												.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.																				.	.	.	.	.																														.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.																																																						.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	A	S	L	L	K	Q	H	L	G	R	E	F	K	L	V	T	P	G	I	R	P	A	Q	R	R	I	M	T	P	A	Q	A	I	A	S	G	S	D	Y	L	V	I	G	R	P	I	T	Q	A	A	H	P	E	.	.	.	.	.	.	.	.	V	V	L	E	E	I	N	S	S	L
Template Known Secondary structure		.	.	.	.	.	.	.										T	T	S												T	T	S										T		S										T		S	S			.	.	.	.	.	.	.	.										T
Template Predicted Secondary structure		.	.	.	.	.	.	.																																																						.	.	.	.	.	.	.	.
Template SS confidence
									162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.									.	.	.	.	.	220	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions