Job Description P0A955 Confidence 93.04% Date Thu Jan 5 11:09:25 GMT 2012 Rank 407 Aligned Residues 198 % Identity 17% Template c3h5dD_ PDB info PDB header:lyase Chain: D: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: dihydrodipicolinate synthase from drug-resistant streptococcus2 pneumoniae Resolution 1.99 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.								.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.									.	.	.	.	.	.	.	60	.	.	.	.	.	.				.	.	.	70	.
Predicted Secondary structure																	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.															.	.	.
Query SS confidence																	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.															.	.	.
Query Sequence		S	I	L	T	T	G	P	V	V	P	V	I	V	V	K	.	.	.	.	.	.	.	K	L	E	H	A	V	P	M	A	K	A	L	V	A	G	G	V	R	V	L	E	V	T	L	R	T	E	C	.	.	.	.	.	.	.	.	A	V	D	A	I	R	A	I	A	K	E	V	P	E	.	.	.	A	I	V	G	A
Query Conservation																	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.															.	.	.
Alig confidence																	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.															.	.	.
Template Conservation
Template Sequence		Q	D	L	K	E	C	K	I	I	T	A	F	I	T	P	F	H	E	D	G	S	I	N	F	D	A	I	P	A	L	I	E	H	L	L	A	H	H	T	D	G	I	L	L	A	G	T	T	A	E	S	P	T	L	T	H	D	E	E	L	E	L	F	A	A	V	Q	K	V	V	N	G	R	V	P	L	I	A	G	V
Template Known Secondary structure					T	T											B		T	T	S	S	B		T	T												T	T							S	S	T	T	T	T	G	G	G	S																S	S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		72	.	.	.	.	.	.				.	80	.	.	.	.	.	.	.		.	.	90	.	.	.	.	.							.	.	.	.	100	.	.	.	.	.	.	.					.	.	110	.	.	.								.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
Predicted Secondary structure									.	.	.										.									.	.	.	.	.	.													.	.	.	.							.	.	.	.	.	.	.
Query SS confidence									.	.	.										.									.	.	.	.	.	.													.	.	.	.							.	.	.	.	.	.	.
Query Sequence		G	T	V	L	N	P	Q	.	.	.	Q	L	A	E	V	T	E	A	G	.	A	Q	F	A	I	S	P	G	.	.	.	.	.	.	L	T	E	P	L	L	K	A	A	T	E	G	.	.	.	.	T	I	P	L	I	P	.	.	.	.	.	.	.	G	I	S	T	V	S	E	L	M	L	G	M	D	Y	G	L	K
Query Conservation									.	.	.										.									.	.	.	.	.	.													.	.	.	.							.	.	.	.	.	.	.
Alig confidence									.	.	.										.									.	.	.	.	.	.													.	.	.	.							.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	T	N	D	T	R	D	S	I	E	F	V	K	E	V	A	E	F	G	G	F	A	A	G	L	A	I	V	P	Y	Y	N	K	P	S	Q	E	G	M	Y	Q	H	F	K	A	I	A	D	A	S	D	L	P	I	I	I	Y	N	I	P	G	R	V	V	V	E	L	T	P	E	T	M	L	R	L	A	D	H	P	N
Template Known Secondary structure				S	S																		S									S	S																	S		S	S												S												T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190								.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure																																																														.	.	.	.	.	.	.
Query SS confidence																																																														.	.	.	.	.	.	.
Query Sequence		E	F	K	F	F	P	A	E	A	N	G	G	V	K	A	L	Q	A	I	A	G	P	F	S	Q	V	R	F	C	P	T	G	G	I	S	P	A	N	Y	R	D	Y	L	A	L	K	S	V	L	C	I	G	G	S	W	L	V	P	A	D	.	.	.	.	.	.	.	A	L	E	A	G	D	Y	D	R	I	T	K	L
Query Conservation																																																														.	.	.	.	.	.	.
Alig confidence							.	.																									.	.	.																											.	.	.	.	.	.	.
Template Conservation							.	.																									.	.	.
Template Sequence		I	I	G	V	K	.	.	E	C	T	S	L	A	N	M	A	Y	L	I	E	H	K	P	E	E	F	L	I	Y	T	G	.	.	.	E	D	G	D	A	F	H	A	M	N	L	G	A	D	G	V	I	S	V	A	S	H	T	N	G	D	E	M	H	E	M	F	T	A	I	A	E	S	D	M	K	K	A	A	A	I
Template Known Secondary structure							.	.			S														S	S						S	.	.	.		G	G	G								T							S	T																	T	T
Template Predicted Secondary structure							.	.																									.	.	.
Template SS confidence
		164	.	.	.	.			.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.				.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		204	.	.	.	.	.	210	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	R	E	A	V	E	G	A	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	R	K	F	I	P	K	V	N
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		239	240	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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