Job Description P0A955 Confidence 97.42% Date Thu Jan 5 11:09:25 GMT 2012 Rank 216 Aligned Residues 156 % Identity 16% Template c3ewbX_ PDB info PDB header:transferase Chain: X: PDB Molecule:2-isopropylmalate synthase; PDBTitle: crystal structure of n-terminal domain of putative 2-2 isopropylmalate synthase from listeria monocytogenes Resolution 2.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.			.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90							.	.	.	.	.	.
Predicted Secondary structure																										.	.																																											.	.	.	.	.	.
Query SS confidence																										.	.																																											.	.	.	.	.	.
Query Sequence		K	L	E	H	A	V	P	M	A	K	A	L	V	A	G	G	V	R	V	L	E	V	T	L	.	.	R	T	E	C	A	V	D	A	I	R	A	I	A	K	E	V	P	E	A	I	V	G	A	G	T	V	L	N	P	Q	Q	L	A	E	V	T	E	A	G	A	Q	F	.	.	.	.	.	.	A	I	S	P	G	L
Query Conservation																										.	.																																											.	.	.	.	.	.
Alig confidence																										.	.																																											.	.	.	.	.	.
Template Conservation
Template Sequence		D	V	K	E	K	I	Q	I	A	L	Q	L	E	K	L	G	I	D	V	I	E	A	G	F	P	I	S	S	P	G	D	F	E	C	V	K	A	I	A	K	A	I	K	H	C	S	V	T	G	L	A	R	C	V	E	G	D	I	D	R	A	E	E	A	L	K	D	A	V	S	P	Q	I	H	I	F	L	A	T	S
Template Known Secondary structure																	T		S							G	G	G																	S	S								S	S												T	T		S	S										S
Template Predicted Secondary structure
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
		97	.																			.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.						.	.	.	.	120					.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.						.	.	.	.
Query SS confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.						.	.	.	.
Query Sequence		T	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	L	L	K	A	A	T	E	G	T	I	P	L	I	P	G	I	.	.	.	.	.	S	T	V	S	E	.	.	.	.	L	M	L	G	M	D	Y	G	L	K	E	F	K	F	F	P	A	E	A	N	G	G	V	K	A	L	Q	A	I
Query Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.						.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.						.	.	.	.
Template Conservation
Template Sequence		D	V	H	X	E	Y	K	L	K	X	S	R	A	E	V	L	A	S	I	K	H	H	I	S	Y	A	R	Q	K	F	D	V	V	Q	F	S	P	E	D	A	T	R	S	D	R	A	F	L	I	E	A	V	Q	T	A	I	D	A	G	A	T	V	I	N	I	P	D	T	V	G	Y	T	N	P	T	E	F	G	Q	L
Template Known Secondary structure								T	T																				T	T		S								T	G	G	G	S															T	T									S	S	S
Template Predicted Secondary structure
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
		150	.	.	.								.	.	.	.	.	.					160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure						.	.	.	.	.	.	.							.	.	.	.
Query SS confidence						.	.	.	.	.	.	.							.	.	.	.
Query Sequence		A	G	P	F	.	.	.	.	.	.	.	S	Q	V	R	F	C	.	.	.	.	P	T	G	G	I	S	P	A	N	Y	R	D	Y	L	A	L	K	S	V	L	C
Query Conservation						.	.	.	.	.	.	.							.	.	.	.
Alig confidence						.	.	.	.	.	.	.							.	.	.	.
Template Conservation
Template Sequence		F	Q	D	L	R	R	E	I	K	Q	F	D	D	I	I	F	A	S	H	C	H	D	D	L	G	X	A	T	A	N	A	L	A	A	I	E	N	G	A	R	R	V
Template Known Secondary structure										T	T	G	G	G	S							B		T	T	S												T	T
Template Predicted Secondary structure
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions