Return to main results Retrieve Phyre Job Id

Job DescriptionP0A955
Confidence91.18%DateThu Jan 5 11:09:25 GMT 2012
Rank444Aligned Residues150
% Identity13%Templatec3eezA_
PDB info PDB header:isomeraseChain: A: PDB Molecule:putative mandelate racemase/muconate lactonizing PDBTitle: crystal structure of a putative mandelate racemase/muconate2 lactonizing enzyme from silicibacter pomeroyi
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   16...20.........30.........40.........50. ........60...... ...70.........80......
Predicted Secondary structure 












..



...




....
Query SS confidence 



































. .














. . .



















. . . .
Query Sequence  PVVPVIVVKKLEHAVPMAKALVAGGVRVLEVTLRTE. . CAVDAIRAIAKEVPE. . . AIVGAGTVLNPQQLAEVTEA. . . .
Query Conservation   

 

           


   


  


     ..     
  
      ...  

   
   
    
  
....
Alig confidence 



































..














...



















....
Template Conservation                          
    




     
   
  

   
    
 



       
      
   
Template Sequence  PIASSVGAKSVEETRAVIDRYRQRGYVAHSVKIGGDVERDIARIRDVEDIREPGEIVLYDVNRGWTRQQALRVMRATEDL
Template Known Secondary structure  BB

B
S

TT



S
TTS

TT

TT


TGGG
Template Predicted Secondary structure 



























Template SS confidence 















































































   134.....140.........150.........160.........170.........180.........190.........200.........210...
 
   87..90.........100.........110.... .....120........ .130.........140.........150.... .....160..
Predicted Secondary structure 












..



.











.



Query SS confidence 



























. .













.

























.







Query Sequence  GAQFAISPGLTEPLLKAATEGTIPLIPG. . ISTVSELMLGMDYG. LKEFKFFPAEANGGVKALQAIAGPFS. QVRFCPTG
Query Conservation 


 
        
       
     
..
 
  
   
   
.

 
   
         
  
     . 


   
Alig confidence 



























..













.

























.







Template Conservation      


    
    
      


 


          
     
 
  
    



        
   
       
Template Sequence  HVMFEQPGETLDDIAAIRPLHSAPVSVDECLVTLQDAARVARDGLAEVFGIKLNRVGGLTRAARMRDIALTHGIDMFVMA
Template Known Secondary structure  T



SSSTGGG




TT

STT

STSTT

Template Predicted Secondary structure 
































Template SS confidence 















































































   214.....220.........230.........240.........250.........260.........270.........280.........290...
 
   163..
Predicted Secondary structure 


Query SS confidence 


Query Sequence  GIS
Query Conservation 

 
Alig confidence 


Template Conservation     
Template Sequence  TGG
Template Known Secondary structure  SS
Template Predicted Secondary structure 


Template SS confidence 


   294..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions